(11 nodes) HOPS complex network (Nectria haematococca)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C7ZH96_NECH7	Uncharacterized protein. (135 aa)
	C7YM47_NECH7	DSBA domain-containing protein. (217 aa)
	C7YPY0_NECH7	Predicted protein. (1366 aa)
	C7YRR7_NECH7	DSBA domain-containing protein. (201 aa)
	C7YW09_NECH7	E3 ubiquitin-protein ligase PEP5. (940 aa)
	C7YYX3_NECH7	Predicted protein. (963 aa)
	C7YZC8_NECH7	CNH domain-containing protein. (1074 aa)
	C7Z171_NECH7	DSBA domain-containing protein. (221 aa)
	C7Z6G7_NECH7	DSBA domain-containing protein. (221 aa)
	C7Z9Q4_NECH7	Probable vacuolar protein sorting-associated protein 16 homolog; Essential for vacuolar protein sorting. Required for vacuole biogenesis, stability and to maintain vacuole morphology. (793 aa)
	C7YIB2_NECH7	Predicted protein. (1846 aa)

Your Current Organism:

Nectria haematococca

NCBI taxonomy Id: 660122
Other names: Nectria haematococca mpVI 77-13-4, [. haematococca mpVI 77-13-4, [Nectria] haematococca mpVI 77-13-4

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C7YIB2_NECH7	C7YPY0_NECH7	C7YIB2	C7YPY0	Predicted protein.	Predicted protein.	0.708
C7YIB2_NECH7	C7YW09_NECH7	C7YIB2	C7YW09	Predicted protein.	E3 ubiquitin-protein ligase PEP5.	0.994
C7YIB2_NECH7	C7YYX3_NECH7	C7YIB2	C7YYX3	Predicted protein.	Predicted protein.	0.994
C7YIB2_NECH7	C7YZC8_NECH7	C7YIB2	C7YZC8	Predicted protein.	CNH domain-containing protein.	0.983
C7YIB2_NECH7	C7Z9Q4_NECH7	C7YIB2	C7Z9Q4	Predicted protein.	Probable vacuolar protein sorting-associated protein 16 homolog; Essential for vacuolar protein sorting. Required for vacuole biogenesis, stability and to maintain vacuole morphology.	0.890
C7YIB2_NECH7	C7ZH96_NECH7	C7YIB2	C7ZH96	Predicted protein.	Uncharacterized protein.	0.890
C7YPY0_NECH7	C7YIB2_NECH7	C7YPY0	C7YIB2	Predicted protein.	Predicted protein.	0.708
C7YPY0_NECH7	C7YW09_NECH7	C7YPY0	C7YW09	Predicted protein.	E3 ubiquitin-protein ligase PEP5.	0.996
C7YPY0_NECH7	C7YYX3_NECH7	C7YPY0	C7YYX3	Predicted protein.	Predicted protein.	0.996
C7YPY0_NECH7	C7YZC8_NECH7	C7YPY0	C7YZC8	Predicted protein.	CNH domain-containing protein.	0.996
C7YPY0_NECH7	C7Z9Q4_NECH7	C7YPY0	C7Z9Q4	Predicted protein.	Probable vacuolar protein sorting-associated protein 16 homolog; Essential for vacuolar protein sorting. Required for vacuole biogenesis, stability and to maintain vacuole morphology.	0.922
C7YPY0_NECH7	C7ZH96_NECH7	C7YPY0	C7ZH96	Predicted protein.	Uncharacterized protein.	0.922
C7YW09_NECH7	C7YIB2_NECH7	C7YW09	C7YIB2	E3 ubiquitin-protein ligase PEP5.	Predicted protein.	0.994
C7YW09_NECH7	C7YPY0_NECH7	C7YW09	C7YPY0	E3 ubiquitin-protein ligase PEP5.	Predicted protein.	0.996
C7YW09_NECH7	C7YYX3_NECH7	C7YW09	C7YYX3	E3 ubiquitin-protein ligase PEP5.	Predicted protein.	0.997
C7YW09_NECH7	C7YZC8_NECH7	C7YW09	C7YZC8	E3 ubiquitin-protein ligase PEP5.	CNH domain-containing protein.	0.997
C7YW09_NECH7	C7Z9Q4_NECH7	C7YW09	C7Z9Q4	E3 ubiquitin-protein ligase PEP5.	Probable vacuolar protein sorting-associated protein 16 homolog; Essential for vacuolar protein sorting. Required for vacuole biogenesis, stability and to maintain vacuole morphology.	0.922
C7YW09_NECH7	C7ZH96_NECH7	C7YW09	C7ZH96	E3 ubiquitin-protein ligase PEP5.	Uncharacterized protein.	0.922
C7YYX3_NECH7	C7YIB2_NECH7	C7YYX3	C7YIB2	Predicted protein.	Predicted protein.	0.994
C7YYX3_NECH7	C7YPY0_NECH7	C7YYX3	C7YPY0	Predicted protein.	Predicted protein.	0.996