STRINGSTRING
SDF06885.1 SDF06885.1 SDF34306.1 SDF34306.1 SDF34340.1 SDF34340.1 SDG20694.1 SDG20694.1 SDG26825.1 SDG26825.1 SDG26973.1 SDG26973.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SDF06885.1Pyridine nucleotide-disulphide oxidoreductase. (416 aa)
SDF34306.1Ferredoxin-nitrite reductase. (578 aa)
SDF34340.1Coenzyme F420 hydrogenase subunit beta. (518 aa)
SDG20694.1Hypothetical protein. (214 aa)
SDG26825.1Assimilatory nitrate reductase (ferredoxin) precursor. (733 aa)
SDG26973.1Ferredoxin-nitrite reductase. (587 aa)
Your Current Organism:
Halorientalis regularis
NCBI taxonomy Id: 660518
Other names: CGMCC 1.10123, H. regularis, Halobacteriaceae archaeon TBN19, Halobacteriaceae archaeon TNN28, Halorientalis regularis Cui et al. 2011, JCM 16425, strain TNN28
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