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| | DSJ_00850 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (245 aa) |
| | DSJ_01345 | Cyclic diguanylate phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. (526 aa) |
| | DSJ_01670 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (388 aa) |
| | DSJ_03325 | Methyl-accepting chemotaxis protein II; Serine sensor receptor; Derived by automated computational analysis using gene prediction method: Protein Homology. (553 aa) |
| | DSJ_03565 | Methyl-accepting chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (478 aa) |
| | arcB | Aerobic respiration two-component sensor histidine kinase ArcB; Derived by automated computational analysis using gene prediction method: Protein Homology. (778 aa) |
| | lplT | Bifunctional 2-acylglycerophosphoethanolamine acyltransferase/acyl-ACP synthetase; Catalyzes the facilitated diffusion of 2-acyl-glycero-3- phosphoethanolamine (2-acyl-GPE) into the cell; Belongs to the major facilitator superfamily. LplT (TC 2.A.1.42) family. (397 aa) |
| | DSJ_04195 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (83 aa) |
| | DSJ_04200 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (108 aa) |
| | DSJ_04205 | Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. (395 aa) |
| | DSJ_04415 | GGDEF domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (364 aa) |
| | barA | Two-component sensor histidine kinase BarA; Derived by automated computational analysis using gene prediction method: Protein Homology. (909 aa) |
| | DSJ_06415 | Transcription factor; Derived by automated computational analysis using gene prediction method: Protein Homology. (515 aa) |
| | DSJ_07730 | Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology. (521 aa) |
| | DSJ_08435 | Cation transporter; Involved in zinc efflux across the cytoplasmic membrane; incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology. (1023 aa) |
| | DSJ_08440 | DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (194 aa) |
| | DSJ_08975 | Chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (631 aa) |
| | uvrY | Two-component system response regulator UvrY; Derived by automated computational analysis using gene prediction method: Protein Homology. (219 aa) |
| | DSJ_10535 | Flagellar biosynthesis protein FlgN; Export chaperone for FlgK and FlgL; Derived by automated computational analysis using gene prediction method: Protein Homology. (143 aa) |
| | flgM | Anti-sigma-28 factor FlgM; Regulates the flagellar specific sigma28 transcription factor; Derived by automated computational analysis using gene prediction method: Protein Homology. (100 aa) |
| | flgB | Flagella basal body P-ring formation protein FlgA; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body. (137 aa) |
| | flgC | Flagellar basal body rod protein FlgC; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the flagella basal body rod proteins family. (134 aa) |
| | flgD | Flagellar basal body rod modification protein; Required for flagellar hook formation. May act as a scaffolding protein. (223 aa) |
| | flgE | Flagellar hook protein FlgE; Derived by automated computational analysis using gene prediction method: Protein Homology. (415 aa) |
| | flgF | FlgF, with FlgB and C, makes up the proximal portion of the flagellar basal body rod; Derived by automated computational analysis using gene prediction method: Protein Homology. (252 aa) |
| | flgG | Flagellar basal-body rod protein FlgG; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the flagella basal body rod proteins family. (260 aa) |
| | flgH | Flagellar basal body L-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. (236 aa) |
| | flgI | Flagellar biosynthesis protein FlgA; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. (369 aa) |
| | flgJ | Flagellar rod assembly protein/muramidase FlgJ; Derived by automated computational analysis using gene prediction method: Protein Homology. (314 aa) |
| | flgK | Flagellar hook-associated protein FlgK; Derived by automated computational analysis using gene prediction method: Protein Homology. (546 aa) |
| | flgL | With FlgK acts as a hook filament junction protein to join the flagellar filament to the hook; Yersinia, Vibrio parahaemolyticus, Bradyrhizobium and other organisms have 2 copies of this and other flagellar genes; Derived by automated computational analysis using gene prediction method: Protein Homology. (320 aa) |
| | DSJ_10710 | Methyl-accepting chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (524 aa) |
| | DSJ_11395 | Resolvase; Derived by automated computational analysis using gene prediction method: Protein Homology. (524 aa) |
| | DSJ_11840 | Chemoreceptor; Derived by automated computational analysis using gene prediction method: Protein Homology. (538 aa) |
| | rcsA | Helix-turn-helix transcriptional regulator; Component of the Rcs signaling system, which controls transcription of numerous genes. Binds to DNA to regulate expression of genes. (211 aa) |
| | fliR | Flagellar biosynthetic protein FliR; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family. (261 aa) |
| | fliQ | Flagellar export apparatus protein FliQ; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family. (89 aa) |
| | fliP | Flagellar biosynthetic protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family. (243 aa) |
| | DSJ_11920 | Flagellar biosynthetic protein FliO; Derived by automated computational analysis using gene prediction method: Protein Homology. (132 aa) |
| | fliN | Flagellar motor switch protein FliN; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family. (137 aa) |
| | fliM | Flagellar motor switch protein FliM; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. (335 aa) |
| | fliL | Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. (161 aa) |
| | DSJ_11940 | Flagellar hook-length control protein FliK; Derived by automated computational analysis using gene prediction method: Protein Homology. (422 aa) |
| | fliJ | Flagellar biosynthesis chaperone FliJ; Flagellar protein that affects chemotactic events. Belongs to the FliJ family. (147 aa) |
| | fliI | Flagellum-specific ATP synthase FliI; Involved in type III protein export during flagellum assembly; Derived by automated computational analysis using gene prediction method: Protein Homology. (453 aa) |
| | fliH | Flagellar assembly protein FliH; Derived by automated computational analysis using gene prediction method: Protein Homology. (231 aa) |
| | fliG | Flagellar motor switch protein FliG; FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. (330 aa) |
| | fliF | Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family. (572 aa) |
| | fliE | Flagellar hook-basal body complex protein FliE; Derived by automated computational analysis using gene prediction method: Protein Homology. (103 aa) |
| | DSJ_12390 | Alpha-amylase; Converts 1,4-alpha-D-glucans to maltodextrin; frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology. (119 aa) |
| | fliS | Flagellar export chaperone FliS; Derived by automated computational analysis using gene prediction method: Protein Homology. (136 aa) |
| | DSJ_12400 | Flagellar filament capping protein FliD; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. (465 aa) |
| | DSJ_12405 | Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. (309 aa) |
| | fliA | RNA polymerase sigma factor FliA; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor controls the expression of flagella-related genes; Belongs to the sigma-70 factor family. FliA subfamily. (240 aa) |
| | DSJ_12500 | Flagellar regulatory protein FliZ; Derived by automated computational analysis using gene prediction method: Protein Homology. (167 aa) |
| | DSJ_12550 | GGDEF domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (382 aa) |
| | ycgF | Diguanylate phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. (403 aa) |
| | DSJ_13350 | Protein phosphatase CheZ; Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P). (207 aa) |
| | DSJ_13355 | Chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (514 aa) |
| | DSJ_13920 | Methyl-accepting chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (547 aa) |
| | DSJ_14430 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (82 aa) |
| | gmr | Cyclic di-GMP phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. (661 aa) |
| | DSJ_14440 | enoyl-CoA hydratase; Regulator of pathogenicity factor RpfF; involved in synthesis of a diffusible signal factor involved in the regulation of extracellular enzymes; Derived by automated computational analysis using gene prediction method: Protein Homology. (288 aa) |
| | DSJ_14970 | Cyclic diguanylate phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. (520 aa) |
| | DSJ_15160 | Chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (514 aa) |
| | flhA | Flagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family. (696 aa) |
| | flhB | Flagellar biosynthesis protein FlhB; Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the type III secretion exporter family. (383 aa) |
| | cheZ | Protein phosphatase CheZ; Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P). (213 aa) |
| | cheY | Two-component system response regulator; Chemotaxis regulator that, when phosphorylated, interacts with the flagellar motor causing the flagella to spin clockwise which causes the cell to tumble; Derived by automated computational analysis using gene prediction method: Protein Homology. (129 aa) |
| | cheB | Chemotaxis response regulator protein-glutamate methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. (349 aa) |
| | cheR | Chemotaxis protein-glutamate O-methyltransferase; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP. (290 aa) |
| | tsr | Methyl-accepting chemotaxis protein II; Serine sensor receptor; Derived by automated computational analysis using gene prediction method: Protein Homology. (558 aa) |
| | DSJ_15410 | Methyl-accepting chemotaxis protein II; Serine sensor receptor; Derived by automated computational analysis using gene prediction method: Protein Homology. (520 aa) |
| | cheW | Chemotaxis protein CheW; Derived by automated computational analysis using gene prediction method: Protein Homology. (165 aa) |
| | cheA | Chemotaxis protein CheA; Derived by automated computational analysis using gene prediction method: Protein Homology. (665 aa) |
| | DSJ_15425 | Flagellar motor protein MotB; Derived by automated computational analysis using gene prediction method: Protein Homology. (419 aa) |
| | motA | Flagellar motor stator protein MotA; Derived by automated computational analysis using gene prediction method: Protein Homology. (295 aa) |
| | flhC | Transcriptional regulator FlhC; Functions in complex with FlhD as a master transcriptional regulator that regulates transcription of several flagellar and non- flagellar operons by binding to their promoter region. Activates expression of class 2 flagellar genes, including fliA, which is a flagellum-specific sigma factor that turns on the class 3 genes. Also regulates genes whose products function in a variety of physiological pathways; Belongs to the FlhC family. (192 aa) |
| | flhD | Flagellar transcriptional activator FlhD; Functions in complex with FlhC as a master transcriptional regulator that regulates transcription of several flagellar and non- flagellar operons by binding to their promoter region. Activates expression of class 2 flagellar genes, including fliA, which is a flagellum-specific sigma factor that turns on the class 3 genes. Also regulates genes whose products function in a variety of physiological pathways; Belongs to the FlhD family. (116 aa) |
| | DSJ_16115 | Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1111 aa) |
| | rcsD | Large repetitive protein YeeJ; Component of the Rcs signaling system, which controls transcription of numerous genes. RcsD is a phosphotransfer intermediate between the sensor kinase RcsC and the response regulator RcsB. It acquires a phosphoryl group from RcsC and transfers it to RcsB. (887 aa) |
| | rcsB | DNA-binding response regulator; Component of the Rcs signaling system, which controls transcription of numerous genes. RcsB is the response regulator that binds to regulatory DNA regions. (216 aa) |
| | rcsC | Two-component system sensor histidine kinase/response regulator; Component of the Rcs signaling system, which controls transcription of numerous genes. RcsC functions as a membrane- associated protein kinase that phosphorylates RcsD in response to environmental signals. The phosphoryl group is then transferred to the response regulator RcsB. (948 aa) |
| | DSJ_17345 | Methyl-accepting chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (606 aa) |
| | DSJ_19830 | Chemotaxis protein CheV; Derived by automated computational analysis using gene prediction method: Protein Homology. (320 aa) |
| | DSJ_20280 | GntR family transcriptional regulator; Internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology. (698 aa) |
| | DSJ_20695 | Chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (514 aa) |
| | DSJ_20715 | Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology. (476 aa) |
| | DSJ_20750 | Hypothetical protein; Incomplete; partial on complete genome; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology. (593 aa) |
| | DSJ_20755 | Transcription factor; Derived by automated computational analysis using gene prediction method: Protein Homology. (489 aa) |
| | DSJ_20905 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (428 aa) |
| | DSJ_20915 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (428 aa) |
| | DSJ_20920 | Thioesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. (131 aa) |
| | DSJ_20925 | Chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (525 aa) |
| | DSJ_20935 | Sensor domain-containing diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology. (312 aa) |
| | DSJ_21555 | Methyl-accepting chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (643 aa) |
| | DSJ_21765 | RNase E specificity factor CsrD; Derived by automated computational analysis using gene prediction method: Protein Homology. (649 aa) |
| | yhjH | Cyclic-guanylate-specific phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. (257 aa) |
| | DSJ_22270 | Biofilm formation regulator HmsP; HmsP in Yersinia pestis plays a role in invasion of epithelial cells; the EAL-domain portion of HmsP from Y. pestis shows phosphodiesterase activity which is required for the inhibition of biofilm formation; inner membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (658 aa) |
