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DSJ_03325 DSJ_03325 DSJ_03565 DSJ_03565 DSJ_06415 DSJ_06415 DSJ_08975 DSJ_08975 DSJ_10535 DSJ_10535 flgM flgM flgB flgB flgC flgC flgD flgD flgE flgE flgF flgF flgG flgG flgH flgH flgI flgI flgJ flgJ flgK flgK flgL flgL DSJ_10710 DSJ_10710 DSJ_11395 DSJ_11395 DSJ_11840 DSJ_11840 fliR fliR fliQ fliQ fliP fliP DSJ_11920 DSJ_11920 fliN fliN fliM fliM fliL fliL DSJ_11940 DSJ_11940 fliJ fliJ fliI fliI fliH fliH fliG fliG fliF fliF fliE fliE fliS fliS DSJ_12400 DSJ_12400 DSJ_12405 DSJ_12405 fliA fliA DSJ_12500 DSJ_12500 DSJ_13350 DSJ_13350 DSJ_13355 DSJ_13355 DSJ_13920 DSJ_13920 DSJ_15160 DSJ_15160 flhA flhA flhB flhB cheZ cheZ cheY cheY cheB cheB cheR cheR tsr tsr DSJ_15410 DSJ_15410 cheW cheW cheA cheA DSJ_15425 DSJ_15425 motA motA DSJ_17345 DSJ_17345 DSJ_19830 DSJ_19830 DSJ_20695 DSJ_20695 DSJ_20755 DSJ_20755 DSJ_20905 DSJ_20905 DSJ_21555 DSJ_21555
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
DSJ_03325Methyl-accepting chemotaxis protein II; Serine sensor receptor; Derived by automated computational analysis using gene prediction method: Protein Homology. (553 aa)
DSJ_03565Methyl-accepting chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (478 aa)
DSJ_06415Transcription factor; Derived by automated computational analysis using gene prediction method: Protein Homology. (515 aa)
DSJ_08975Chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (631 aa)
DSJ_10535Flagellar biosynthesis protein FlgN; Export chaperone for FlgK and FlgL; Derived by automated computational analysis using gene prediction method: Protein Homology. (143 aa)
flgMAnti-sigma-28 factor FlgM; Regulates the flagellar specific sigma28 transcription factor; Derived by automated computational analysis using gene prediction method: Protein Homology. (100 aa)
flgBFlagella basal body P-ring formation protein FlgA; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body. (137 aa)
flgCFlagellar basal body rod protein FlgC; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the flagella basal body rod proteins family. (134 aa)
flgDFlagellar basal body rod modification protein; Required for flagellar hook formation. May act as a scaffolding protein. (223 aa)
flgEFlagellar hook protein FlgE; Derived by automated computational analysis using gene prediction method: Protein Homology. (415 aa)
flgFFlgF, with FlgB and C, makes up the proximal portion of the flagellar basal body rod; Derived by automated computational analysis using gene prediction method: Protein Homology. (252 aa)
flgGFlagellar basal-body rod protein FlgG; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the flagella basal body rod proteins family. (260 aa)
flgHFlagellar basal body L-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. (236 aa)
flgIFlagellar biosynthesis protein FlgA; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. (369 aa)
flgJFlagellar rod assembly protein/muramidase FlgJ; Derived by automated computational analysis using gene prediction method: Protein Homology. (314 aa)
flgKFlagellar hook-associated protein FlgK; Derived by automated computational analysis using gene prediction method: Protein Homology. (546 aa)
flgLWith FlgK acts as a hook filament junction protein to join the flagellar filament to the hook; Yersinia, Vibrio parahaemolyticus, Bradyrhizobium and other organisms have 2 copies of this and other flagellar genes; Derived by automated computational analysis using gene prediction method: Protein Homology. (320 aa)
DSJ_10710Methyl-accepting chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (524 aa)
DSJ_11395Resolvase; Derived by automated computational analysis using gene prediction method: Protein Homology. (524 aa)
DSJ_11840Chemoreceptor; Derived by automated computational analysis using gene prediction method: Protein Homology. (538 aa)
fliRFlagellar biosynthetic protein FliR; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family. (261 aa)
fliQFlagellar export apparatus protein FliQ; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family. (89 aa)
fliPFlagellar biosynthetic protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family. (243 aa)
DSJ_11920Flagellar biosynthetic protein FliO; Derived by automated computational analysis using gene prediction method: Protein Homology. (132 aa)
fliNFlagellar motor switch protein FliN; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family. (137 aa)
fliMFlagellar motor switch protein FliM; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. (335 aa)
fliLFlagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. (161 aa)
DSJ_11940Flagellar hook-length control protein FliK; Derived by automated computational analysis using gene prediction method: Protein Homology. (422 aa)
fliJFlagellar biosynthesis chaperone FliJ; Flagellar protein that affects chemotactic events. Belongs to the FliJ family. (147 aa)
fliIFlagellum-specific ATP synthase FliI; Involved in type III protein export during flagellum assembly; Derived by automated computational analysis using gene prediction method: Protein Homology. (453 aa)
fliHFlagellar assembly protein FliH; Derived by automated computational analysis using gene prediction method: Protein Homology. (231 aa)
fliGFlagellar motor switch protein FliG; FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. (330 aa)
fliFFlagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family. (572 aa)
fliEFlagellar hook-basal body complex protein FliE; Derived by automated computational analysis using gene prediction method: Protein Homology. (103 aa)
fliSFlagellar export chaperone FliS; Derived by automated computational analysis using gene prediction method: Protein Homology. (136 aa)
DSJ_12400Flagellar filament capping protein FliD; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. (465 aa)
DSJ_12405Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. (309 aa)
fliARNA polymerase sigma factor FliA; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor controls the expression of flagella-related genes; Belongs to the sigma-70 factor family. FliA subfamily. (240 aa)
DSJ_12500Flagellar regulatory protein FliZ; Derived by automated computational analysis using gene prediction method: Protein Homology. (167 aa)
DSJ_13350Protein phosphatase CheZ; Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P). (207 aa)
DSJ_13355Chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (514 aa)
DSJ_13920Methyl-accepting chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (547 aa)
DSJ_15160Chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (514 aa)
flhAFlagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family. (696 aa)
flhBFlagellar biosynthesis protein FlhB; Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the type III secretion exporter family. (383 aa)
cheZProtein phosphatase CheZ; Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P). (213 aa)
cheYTwo-component system response regulator; Chemotaxis regulator that, when phosphorylated, interacts with the flagellar motor causing the flagella to spin clockwise which causes the cell to tumble; Derived by automated computational analysis using gene prediction method: Protein Homology. (129 aa)
cheBChemotaxis response regulator protein-glutamate methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. (349 aa)
cheRChemotaxis protein-glutamate O-methyltransferase; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP. (290 aa)
tsrMethyl-accepting chemotaxis protein II; Serine sensor receptor; Derived by automated computational analysis using gene prediction method: Protein Homology. (558 aa)
DSJ_15410Methyl-accepting chemotaxis protein II; Serine sensor receptor; Derived by automated computational analysis using gene prediction method: Protein Homology. (520 aa)
cheWChemotaxis protein CheW; Derived by automated computational analysis using gene prediction method: Protein Homology. (165 aa)
cheAChemotaxis protein CheA; Derived by automated computational analysis using gene prediction method: Protein Homology. (665 aa)
DSJ_15425Flagellar motor protein MotB; Derived by automated computational analysis using gene prediction method: Protein Homology. (419 aa)
motAFlagellar motor stator protein MotA; Derived by automated computational analysis using gene prediction method: Protein Homology. (295 aa)
DSJ_17345Methyl-accepting chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (606 aa)
DSJ_19830Chemotaxis protein CheV; Derived by automated computational analysis using gene prediction method: Protein Homology. (320 aa)
DSJ_20695Chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (514 aa)
DSJ_20755Transcription factor; Derived by automated computational analysis using gene prediction method: Protein Homology. (489 aa)
DSJ_20905Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (428 aa)
DSJ_21555Methyl-accepting chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (643 aa)
Your Current Organism:
Pantoea stewartii
NCBI taxonomy Id: 660596
Other names: P. stewartii subsp. stewartii DC283, Pantoea stewartii subsp. stewartii DC283, Pantoea stewartii subsp. stewartii str. DC283, Pantoea stewartii subsp. stewartii strain DC283
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