(6 nodes) Periplasmic binding protein, and ABC transporter, permease network (Pantoea stewartii)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

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gene fusions

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Others

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protein homology

Your Input:
	DSJ_11530	Rhizopine-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (307 aa)
	rbsA-2	D-xylose ABC transporter ATP-binding protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family. (494 aa)
	DSJ_11540	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. (344 aa)
	mglC	Galactoside ABC transporter permease MglC; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. (336 aa)
	mglA	Galactose/methyl galactoside ABC transporter ATP-binding protein MglA; Derived by automated computational analysis using gene prediction method: Protein Homology. (506 aa)
	mglB	Methyl-galactoside ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (331 aa)

Your Current Organism:

Pantoea stewartii

NCBI taxonomy Id: 660596
Other names: P. stewartii subsp. stewartii DC283, Pantoea stewartii subsp. stewartii DC283, Pantoea stewartii subsp. stewartii str. DC283, Pantoea stewartii subsp. stewartii strain DC283

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DSJ_11530	DSJ_11540	DSJ_11530	DSJ_11540	Rhizopine-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.	0.987
DSJ_11530	mglA	DSJ_11530	DSJ_16310	Rhizopine-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Galactose/methyl galactoside ABC transporter ATP-binding protein MglA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.613
DSJ_11530	mglC	DSJ_11530	DSJ_16305	Rhizopine-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Galactoside ABC transporter permease MglC; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.	0.794
DSJ_11530	rbsA-2	DSJ_11530	DSJ_11535	Rhizopine-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	D-xylose ABC transporter ATP-binding protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.	0.980
DSJ_11540	DSJ_11530	DSJ_11540	DSJ_11530	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.	Rhizopine-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.987
DSJ_11540	mglA	DSJ_11540	DSJ_16310	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.	Galactose/methyl galactoside ABC transporter ATP-binding protein MglA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.817
DSJ_11540	mglB	DSJ_11540	DSJ_16315	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.	Methyl-galactoside ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.758
DSJ_11540	rbsA-2	DSJ_11540	DSJ_11535	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.	D-xylose ABC transporter ATP-binding protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.	0.990
mglA	DSJ_11530	DSJ_16310	DSJ_11530	Galactose/methyl galactoside ABC transporter ATP-binding protein MglA; Derived by automated computational analysis using gene prediction method: Protein Homology.	Rhizopine-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.613
mglA	DSJ_11540	DSJ_16310	DSJ_11540	Galactose/methyl galactoside ABC transporter ATP-binding protein MglA; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.	0.817
mglA	mglB	DSJ_16310	DSJ_16315	Galactose/methyl galactoside ABC transporter ATP-binding protein MglA; Derived by automated computational analysis using gene prediction method: Protein Homology.	Methyl-galactoside ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.988
mglA	mglC	DSJ_16310	DSJ_16305	Galactose/methyl galactoside ABC transporter ATP-binding protein MglA; Derived by automated computational analysis using gene prediction method: Protein Homology.	Galactoside ABC transporter permease MglC; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.	0.994
mglB	DSJ_11540	DSJ_16315	DSJ_11540	Methyl-galactoside ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.	0.758
mglB	mglA	DSJ_16315	DSJ_16310	Methyl-galactoside ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Galactose/methyl galactoside ABC transporter ATP-binding protein MglA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.988
mglB	mglC	DSJ_16315	DSJ_16305	Methyl-galactoside ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Galactoside ABC transporter permease MglC; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.	0.983
mglB	rbsA-2	DSJ_16315	DSJ_11535	Methyl-galactoside ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	D-xylose ABC transporter ATP-binding protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.	0.591
mglC	DSJ_11530	DSJ_16305	DSJ_11530	Galactoside ABC transporter permease MglC; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.	Rhizopine-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.794
mglC	mglA	DSJ_16305	DSJ_16310	Galactoside ABC transporter permease MglC; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.	Galactose/methyl galactoside ABC transporter ATP-binding protein MglA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.994
mglC	mglB	DSJ_16305	DSJ_16315	Galactoside ABC transporter permease MglC; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.	Methyl-galactoside ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.983
mglC	rbsA-2	DSJ_16305	DSJ_11535	Galactoside ABC transporter permease MglC; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.	D-xylose ABC transporter ATP-binding protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.	0.794

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