STRINGSTRING
nhaA nhaA hutU hutU DSJ_09105 DSJ_09105 DSJ_09110 DSJ_09110 DSJ_09120 DSJ_09120 DSJ_09125 DSJ_09125
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
nhaANa(+)/H(+) antiporter NhaA; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the NhaA Na(+)/H(+) (TC 2.A.33) antiporter family. (392 aa)
hutUHistidine ammonia-lyase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate. (560 aa)
DSJ_09105IS630 family transposase; Frameshifted; incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology. (251 aa)
DSJ_09110HutD family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (181 aa)
DSJ_09120Formimidoylglutamate deiminase; Internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology. (405 aa)
DSJ_09125N-formylglutamate deformylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (262 aa)
Your Current Organism:
Pantoea stewartii
NCBI taxonomy Id: 660596
Other names: P. stewartii subsp. stewartii DC283, Pantoea stewartii subsp. stewartii DC283, Pantoea stewartii subsp. stewartii str. DC283, Pantoea stewartii subsp. stewartii strain DC283
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