STRINGSTRING
phnI phnI phnJ phnJ phnG phnG DSJ_19520 DSJ_19520 DSJ_11680 DSJ_11680 phnN phnN phnL phnL phnK phnK DSJ_11645 DSJ_11645
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
phnICarbon-phosphorus lyase complex subunit PhnI; Required for the use of phosphonate and phosphite; Derived by automated computational analysis using gene prediction method: Protein Homology. (358 aa)
phnJCarbon-phosphorus lyase complex subunit PhnJ; Catalyzes the breakage of the C-P bond in alpha-D-ribose 1- methylphosphonate 5-phosphate (PRPn) forming alpha-D-ribose. Belongs to the PhnJ family. (282 aa)
phnGPhosphonate C-P lyase system protein PhnG; Derived by automated computational analysis using gene prediction method: Protein Homology. (149 aa)
DSJ_19520Derived by automated computational analysis using gene prediction method: Protein Homology. (411 aa)
DSJ_11680Phosphonate metabolism protein PhnP; Derived by automated computational analysis using gene prediction method: Protein Homology. (256 aa)
phnNPhosphonate metabolism protein PhnM; Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP). (178 aa)
phnLPhosphonate C-P lyase system protein PhnL; Derived by automated computational analysis using gene prediction method: Protein Homology. (239 aa)
phnKPhosphonate C-P lyase system protein PhnK; Derived by automated computational analysis using gene prediction method: Protein Homology. (253 aa)
DSJ_11645Phosphonate C-P lyase system protein PhnH; Derived by automated computational analysis using gene prediction method: Protein Homology. (194 aa)
Your Current Organism:
Pantoea stewartii
NCBI taxonomy Id: 660596
Other names: P. stewartii subsp. stewartii DC283, Pantoea stewartii subsp. stewartii DC283, Pantoea stewartii subsp. stewartii str. DC283, Pantoea stewartii subsp. stewartii strain DC283
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