STRINGSTRING
trg trg basS basS DSJ_15410 DSJ_15410 tsr tsr rstB rstB envZ envZ cpxA cpxA DSJ_03325 DSJ_03325 DSJ_03660 DSJ_03660 barA barA DSJ_06415 DSJ_06415 DSJ_07855 DSJ_07855 DSJ_08975 DSJ_08975 DSJ_10530 DSJ_10530 phoQ phoQ DSJ_11395 DSJ_11395 DSJ_11705 DSJ_11705 DSJ_13920 DSJ_13920 DSJ_22270 DSJ_22270 DSJ_21555 DSJ_21555 DSJ_21440 DSJ_21440 DSJ_20755 DSJ_20755 DSJ_18355 DSJ_18355 DSJ_17345 DSJ_17345 baeS baeS
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
trgMethyl-accepting chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (568 aa)
basSTwo-component system sensor histidine kinase BasS; Derived by automated computational analysis using gene prediction method: Protein Homology. (355 aa)
DSJ_15410Methyl-accepting chemotaxis protein II; Serine sensor receptor; Derived by automated computational analysis using gene prediction method: Protein Homology. (520 aa)
tsrMethyl-accepting chemotaxis protein II; Serine sensor receptor; Derived by automated computational analysis using gene prediction method: Protein Homology. (558 aa)
rstBTwo-component system sensor histidine kinase RstB; Derived by automated computational analysis using gene prediction method: Protein Homology. (433 aa)
envZTwo-component system sensor histidine kinase EnvZ; Derived by automated computational analysis using gene prediction method: Protein Homology. (454 aa)
cpxATwo-component system sensor histidine kinase CpxA; Derived by automated computational analysis using gene prediction method: Protein Homology. (459 aa)
DSJ_03325Methyl-accepting chemotaxis protein II; Serine sensor receptor; Derived by automated computational analysis using gene prediction method: Protein Homology. (553 aa)
DSJ_03660DNA-binding response regulator; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology. (449 aa)
barATwo-component sensor histidine kinase BarA; Derived by automated computational analysis using gene prediction method: Protein Homology. (909 aa)
DSJ_06415Transcription factor; Derived by automated computational analysis using gene prediction method: Protein Homology. (515 aa)
DSJ_07855Two-component system sensor histidine kinase NarQ; Derived by automated computational analysis using gene prediction method: Protein Homology. (562 aa)
DSJ_08975Chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (631 aa)
DSJ_10530Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (564 aa)
phoQSensor protein PhoQ; Derived by automated computational analysis using gene prediction method: Protein Homology. (489 aa)
DSJ_11395Resolvase; Derived by automated computational analysis using gene prediction method: Protein Homology. (524 aa)
DSJ_11705Hybrid sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (866 aa)
DSJ_13920Methyl-accepting chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (547 aa)
DSJ_22270Biofilm formation regulator HmsP; HmsP in Yersinia pestis plays a role in invasion of epithelial cells; the EAL-domain portion of HmsP from Y. pestis shows phosphodiesterase activity which is required for the inhibition of biofilm formation; inner membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (658 aa)
DSJ_21555Methyl-accepting chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (643 aa)
DSJ_21440Methyl-accepting chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (519 aa)
DSJ_20755Transcription factor; Derived by automated computational analysis using gene prediction method: Protein Homology. (489 aa)
DSJ_18355Two-component sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (449 aa)
DSJ_17345Methyl-accepting chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (606 aa)
baeSTwo-component system sensor histidine kinase BaeA; Derived by automated computational analysis using gene prediction method: Protein Homology. (462 aa)
Your Current Organism:
Pantoea stewartii
NCBI taxonomy Id: 660596
Other names: P. stewartii subsp. stewartii DC283, Pantoea stewartii subsp. stewartii DC283, Pantoea stewartii subsp. stewartii str. DC283, Pantoea stewartii subsp. stewartii strain DC283
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