Your Input: | |
| | LLO_1082 | Hypothetical protein of unknown function; Equals llo1082. (260 aa) |
| | LLO_1106 | Hypothetical protein; Equals llo1106. (727 aa) |
| | LLO_1107 | Putative surface antigen; Equals llo1107. (563 aa) |
| | LLO_1135 | Equals llo1135; similar to transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. (304 aa) |
| | hmgA | Homogentisate 1,2-dioxygenase; Equals llo1153. (418 aa) |
| | dnaN | DNA polymerase III, beta chain; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of r [...] (367 aa) |
| | LLO_0010 | Hypothetical protein, carbohydrate-selective porin OprB domain; Equals llo0010. (438 aa) |
| | LLO_0068 | Equals llo0068; conserved hypothetical protein. (530 aa) |
| | dcd | Deoxycytidine triphosphate deaminase; Catalyzes the deamination of dCTP to dUTP. (188 aa) |
| | fumC | Fumarate hydratase, class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. (463 aa) |
| | tatC | Putative Sec-independent protein translocase TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides. (234 aa) |
| | LLO_0139 | Hypothetical protein; Equals llo0139. (183 aa) |
| | LLO_0140 | Hypothetical protein; Equals llo0140. (189 aa) |
| | tatB | Putative TatB protein (twin arginine translocation); Equals llo0141. (75 aa) |
| | ruvC | Crossover junction endodeoxyribonuclease ruvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group. (172 aa) |
| | tatA | Putative TatA protein(twin arginine translocation); Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. (60 aa) |
| | ubiE | Ubiquinone/menaquinone biosynthesis methyltransferase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3- methyl-6-methoxy-1,4-benzoquinol (DMQH2). (250 aa) |
| | coxC | Cytochrome c oxidase, subunit III; Equals llo0154. (289 aa) |
| | priA | Primosomal protein N' (replication factor Y); Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily. (753 aa) |
| | LLO_0205 | Equals llo0205; similar to guanosine monophosphate reductase GuaC. (336 aa) |
| | LLO_0222 | Putative methyltransferase; Equals llo0222. (244 aa) |
| | typA | Equals llo0249; similar to GTP-binding protein TypA/BipA. (608 aa) |
| | hda | ATPase regulatory factor involved in DnaA inactivation; Equals llo0268; Belongs to the DnaA family. HdA subfamily. (230 aa) |
| | nuoE | NADH dehydrogenase I chain E; Equals llo0281. (167 aa) |
| | nuoF | NADH dehydrogenase I chain F; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family. (425 aa) |
| | nuoG | NADH dehydrogenase I chain G; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Belongs to the complex I 75 kDa subunit family. (784 aa) |
| | nuoL | NADH-quinone oxidoreductase chain L; Equals llo0288. (657 aa) |
| | nuoM | NADH-quinone oxidoreductase chain M; Equals llo0289. (501 aa) |
| | dnaX | DNA polymerase III, gamma and tau subunits; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. (549 aa) |
| | fabI | Enoyl-[acyl-carrier-protein] reductase, NADH-dependent; Equals llo0314. (256 aa) |
| | atpB | V-type ATP synthase beta chain (V-type ATPase subunit B); Equals llo0315. (459 aa) |
| | LLO_0316 | Putative V-type ATP synthase, subunit d; Equals llo0316. (214 aa) |
| | LLO_0317 | Putative V-type ATP synthase, subunit i; Equals llo0317; Belongs to the V-ATPase 116 kDa subunit family. (616 aa) |
| | LLO_0318 | Putative V-type ATP synthase, subunit k; Equals llo0318. (146 aa) |
| | LLO_0319 | Putative V-type ATP synthase, subunit e; Equals llo0319. (234 aa) |
| | atpA | V-type ATP synthase alpha chain 1 (V-type ATPase subunit A 1); Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit. Belongs to the ATPase alpha/beta chains family. (603 aa) |
| | rpsI | 30S ribosomal subunit protein S9; Equals llo0346; Belongs to the universal ribosomal protein uS9 family. (143 aa) |
| | petB | Putative ubiquinol--cytochrome c reductase, cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. (403 aa) |
| | mutL | DNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex. (544 aa) |
| | LLO_0380 | Putative non-ribosomal peptide synthase (C-terminal part); Equals llo0379b. (154 aa) |
| | sdhC | Succinate dehydrogenase, cytochrome b556 subunit; Equals llo0393. (124 aa) |
| | sdhA | Succinate dehydrogenase flavoprotein subunit; Equals llo0395; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily. (589 aa) |
| | sucA | 2-oxoglutarate dehydrogenase, E1 subunit; Equals llo0397. (934 aa) |
| | sucB | Dihydrolipoamide succinyltransferase, E2 subunit; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2). (409 aa) |
| | sucC | succinyl-CoA synthetase, beta subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. (386 aa) |
| | sucD | succinyl-CoA synthetase, alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. (292 aa) |
| | pdxH | Putative pyridoxine 5'-phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP). (215 aa) |
| | fis | Global DNA-binding transcriptional dual regulator; Equals llo0406; similar to DNA-binding proteins Fis; Belongs to the transcriptional regulatory Fis family. (93 aa) |
| | prs | Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily. (315 aa) |
| | LLO_0422 | Equals llo0422; Predicted membrane protein, similar to putative permease. (359 aa) |
| | LLO_0423 | Equals llo0423; Putative membrane protein. (356 aa) |
| | LLO_0442 | Putative ABC transporter, permease protein; Equals llo0442. (386 aa) |
| | indA | Indigoidine synthase A-like protein, uncharacterized enzyme involved in pigment biosynthesis; Catalyzes the reversible cleavage of pseudouridine 5'- phosphate (PsiMP) to ribose 5-phosphate and uracil. Functions biologically in the cleavage direction, as part of a pseudouridine degradation pathway; Belongs to the pseudouridine-5'-phosphate glycosidase family. (301 aa) |
| | ppk | Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family. (694 aa) |
| | rplA | 50S ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. (231 aa) |
| | rplJ | 50S ribosomal subunit protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. (174 aa) |
| | rpoB | RNA polymerase B-subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1368 aa) |
| | rpoC | RNA polymerase beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1398 aa) |
| | rpsL | 30S ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit. (126 aa) |
| | rpsL-2 | 30S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. (175 aa) |
| | rplB | 50S ribosomal subunit protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. (275 aa) |
| | rpsS | 30S ribosomal subunit protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA. (92 aa) |
| | rplV | 50S ribosomal subunit protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome. (111 aa) |
| | rplN | 50S ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. (121 aa) |
| | rpsE | 30S ribosomal subunit protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. (169 aa) |
| | rpmD | 50S ribosomal subunit protein L30; Equals llo0504. (61 aa) |
| | rplO | 50S ribosomal subunit protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. (144 aa) |
| | secY | Preprotein translocase, SecY subunit; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. (444 aa) |
| | rpsD | 30S ribosomal subunit protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. (206 aa) |
| | rpoA | DNA-directed RNA polymerase alpha chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (330 aa) |
| | smpA | Small protein A, tmRNA-binding; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. (131 aa) |
| | LLO_0546 | Putative HlyD family secretion protein; Equals llo0546; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (383 aa) |
| | uvrA | Excinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate. (942 aa) |
| | bioC | Biotin synthase BioC; Converts the free carboxyl group of a malonyl-thioester to its methyl ester by transfer of a methyl group from S-adenosyl-L- methionine (SAM). It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway. (285 aa) |
| | xseB | Putative exodeoxyribonuclease VII, small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family. (72 aa) |
| | gpsA | Equals llo0575; similar to glycerol-3-phosphate dehydrogenase (NAD+); Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. (329 aa) |
| | lolE | Outer membrane-specific lipoprotein transporter subunit; Equals llo0593; similar to ABC transporter, permease component. (414 aa) |
| | sdhC-2 | Succinate dehydrogenase, cytochrome b556 subunit; Equals llo0662. (124 aa) |
| | sdhA-2 | Succinate dehydrogenase flavoprotein subunit; Equals llo0664; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily. (586 aa) |
| | LLO_0665 | Putative DNA-3-methyladenine glycosylase; Equals llo0665. (304 aa) |
| | rtcB | Equals llo0715; similar to unknown proteins; Belongs to the RtcB family. (476 aa) |
| | LLO_0716 | Hypothetical protein; Equals llo0716. (109 aa) |
| | LLO_0736 | Hypothetical protein, weakly similar to eukaryotic protein; Equals llo0736. (576 aa) |
| | thiJ | Putative 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis enzyme; Equals llo0768. (211 aa) |
| | acrA | RND efflux membrane fusion protein, acriflavin resistance protein E; Equals llo0820; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (423 aa) |
| | dnaB | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily. (460 aa) |
| | LLO_0843 | Hypothetical protein; Equals llo0843. (169 aa) |
| | LLO_0871 | Putative SAM dependent methyltransferase; Equals llo0871. (326 aa) |
| | galU | Glucose-1-phosphate uridylyltransferase; Equals llo0885. (291 aa) |
| | recQ | Equals llo0889; similar to ATP-dependent DNA helicase RecQ. (604 aa) |
| | rpoZ | RNA polymerase omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. (67 aa) |
| | thiS | Putative thiamine biosynthesis protein ThiS; Equals llo0922. (66 aa) |
| | LLO_0980 | Putative ABC transporter, ATP-binding protein; Equals llo0980. (308 aa) |
| | LLO_0981 | Putative ABC transporter, permease component; Equals llo0981. (377 aa) |
| | fabI-2 | Equals llo1044; similar to Enoyl-[acyl-carrier-protein] reductase. (262 aa) |
| | uvrD | DNA helicase II; Equals llo1055. (721 aa) |
| | mccA | Equals llo1074; similar to Acetyl/propionyl-CoA carboxylase, alpha subunit. (654 aa) |
| | LLO_1075 | Equals llo1075; similar to enoyl-CoA hydratase/isomerase. (271 aa) |
| | LLO_1076 | Equals llo1076; similar to Acetyl/propionyl-CoA carboxylase, beta subunit. (535 aa) |
| | rnpA | Putative ribonuclease P protein component (RNase P); RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme. (114 aa) |
| | atpB-2 | Putative H+-transporting ATP synthase chain a; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. (277 aa) |
| | atpE | Putative H+-transporting ATP synthase chain c; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. (91 aa) |
| | atpF | Putative H+-transporting ATP synthase chain b; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family. (156 aa) |
| | atpH | F1 sector of membrane-bound ATP synthase, delta subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation; Belongs to the ATPase delta chain family. (180 aa) |
| | atpA-2 | F1 sector of membrane-bound ATP synthase, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family. (517 aa) |
| | atpG | Putative H+-transporting ATP synthase chain gamma; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex. (288 aa) |
| | atpD | Putative H+-transporting ATP synthase beta chain; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family. (458 aa) |
| | atpC | Putative H+-transporting ATP synthase epsilon chain; Produces ATP from ADP in the presence of a proton gradient across the membrane. (140 aa) |
| | parC | DNA topoisomerase IV, A subunit; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase GyrA/ParC subunit family. ParC type 1 subfamily. (753 aa) |
| | LLO_3401 | Putative transcriptional regulator, LysR family; Equals llo3401; Belongs to the LysR transcriptional regulatory family. (300 aa) |
| | LLO_3400 | Equals llo3400; similar to methyltransferase. (213 aa) |
| | LLO_3373 | Hypothetical protein; Equals llo3373. (293 aa) |
| | LLO_3363 | Conserved hypothetical protein; Equals llo3363. (404 aa) |
| | uvrB | Excinuclease ABC subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate [...] (663 aa) |
| | LLO_3344 | Hypothetical protein; Equals llo3344. (706 aa) |
| | ubiH | Equals llo3337; similar to 2-octaprenyl-6-methoxyphenol hydroxylase. (409 aa) |
| | visC | Putative oxidoreductase with FAD/NAD(P)-binding domain; Equals llo3336. (390 aa) |
| | LLO_3299 | Putative methyltransferase involved in chemotaxis (CheR domain); Equals llo3299. (293 aa) |
| | gcsB | Probable glycine dehydrogenase (decarboxylating) subunit 2; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. C-terminal subunit subfamily. (488 aa) |
| | gcsA | Probable glycine dehydrogenase (decarboxylating) subunit 1; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein. (459 aa) |
| | gcvH | Putative glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. (125 aa) |
| | LLO_3272 | Equals llo3272; similar to 3-hydroxyisobutyrate dehydrogenase; Belongs to the HIBADH-related family. (298 aa) |
| | galU-2 | Glucose-1-phosphate uridylyltransferase; Equals llo3171. (300 aa) |
| | bexD | Capsule polysaccharide export protein bexD precursor; Equals llo3149. (369 aa) |
| | glsA | Equals llo3142; similar to glutaminase; Belongs to the glutaminase family. (309 aa) |
| | budB | Putative acetolactate synthase; Equals llo3139; Belongs to the TPP enzyme family. (546 aa) |
| | sufB | Component of SufBCD complex; Equals llo3072; similar to ABC transporter, permease component. (482 aa) |
| | sufC | Component of SufBCD complex, ATP-binding component of ABC superfamily; Equals llo3071; similar to ABC transporter ATP-binding protein. (249 aa) |
| | sufD | Component of SufBCD complex; Equals llo3070; similar ABC transporter, permease component. (426 aa) |
| | dfp | Putative DNA/pantothenate metabolism flavoprotein; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family. (403 aa) |
| | LLO_3029 | Hypothetical protein; Equals llo3029. (282 aa) |
| | LLO_3025 | Putative citrate lyase beta subunit; Equals llo3025; Belongs to the HpcH/HpaI aldolase family. (284 aa) |
| | LLO_2970 | Hypothetical protein (N-terminal part); Equals llo2969. (254 aa) |
| | traI | TraI protein; Equals llo2892. (620 aa) |
| | traC-2 | traD protein; Equals llo2889. (730 aa) |
| | LLO_2869 | Putative metallophosphoesterase; Equals llo2869. (377 aa) |
| | LLO_2866 | Putative type I restriction-modification system (methylase_S); Equals llo2866. (466 aa) |
| | dnaG | DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. (572 aa) |
| | ffh | Putative signal recognition particle protein Ffh; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the indivi [...] (459 aa) |
| | yadG | Equals llo2822; Highly similar to ATP-binding component of ABC transporter. (304 aa) |
| | yadH | Putative transporter subunit: membrane component of ABC superfamily; Equals llo2821; Highly similar to ABC-type multidrug transport system, permease component. (257 aa) |
| | ompR | DNA-binding response regulator in two-component regulatory system with EnvZ; Equals llo2778. (242 aa) |
| | LLO_2772 | Putative transcriptional regulator, LysR family; Equals llo2772; Belongs to the LysR transcriptional regulatory family. (305 aa) |
| | accC | Biotin carboxylase (A subunit of acetyl-CoA carboxylase); This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. (446 aa) |
| | accB | acetyl-CoA carboxylase biotin carboxyl carrier protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. (161 aa) |
| | yhbH | Equals llo2710; similar to putative sigma-54 modulation protein. (97 aa) |
| | rpoN | RNA polymerase sigma-54 factor (sigma-L); Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. (465 aa) |
| | yggH | tRNA (m7G46) methyltransferase, SAM-dependent; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. (224 aa) |
| | yaeT | Outer membrane protein assembly factor; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. (770 aa) |
| | LLO_2674 | Putative pyridoxamine 5'-phosphate oxidase; Equals llo2674. (207 aa) |
| | LLO_2668 | Hypothetical protein; Equals llo2667. (543 aa) |
| | LLO_2659 | Peptidase S24 family protein; Equals llo2659; Belongs to the peptidase S24 family. (168 aa) |
| | uvrC | Putative excinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision. (620 aa) |
| | holC | Equals llo2636; similar to DNA polymerase III, chi subunit. (144 aa) |
| | LLO_2603 | Equals llo2603; similar to propionyl-CoA carboxylase beta chain. (472 aa) |
| | cydB | Cytochrome d ubiquinol oxidase subunit II; Equals llo2594. (379 aa) |
| | cydA | Cytochrome d ubiquinol oxidase subunit I; Equals llo2593. (509 aa) |
| | potA | Putative spermidine/putrescine transport system ATP-binding protein PotA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family. (364 aa) |
| | LLO_2576 | Hypothetical protein; Equals llo2576. (177 aa) |
| | hslV | Peptidase component of the HslUV protease (Heat shock protein); Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery. (182 aa) |
| | hslU | ATP-dependent hsl protease ATP-binding subunit HslU; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis. (440 aa) |
| | wrbA | Equals llo2566; similar to flavoprotein WrbA (Trp repressor binding protein); Belongs to the WrbA family. (201 aa) |
| | mdcC | Putative malonate decarboxylase, delta subunit; Subunit of malonate decarboxylase, it is an acyl carrier protein to which acetyl and malonyl thioester residues are bound via a 2'-(5''-phosphoribosyl)-3'-dephospho-CoA prosthetic group and turn over during the catalytic mechanism. (396 aa) |
| | mdcE | Malonate decarboxylase gamma-subunit, MdcE; Equals llo2545. (235 aa) |
| | eno | Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis. (422 aa) |
| | recG | ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily. (690 aa) |
| | carA | Carbamoyl-phosphate synthetase, glutamine (small subunit); Equals llo2503; Belongs to the CarA family. (370 aa) |
| | hypE | Hydrogenase expression/formation protein HypE; Equals llo2447. (353 aa) |
| | hypF | Hydrogenase maturation protein HypF; Involved in the maturation of [NiFe] hydrogenases. Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of [NiFe]-hydrogenases. HypF functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide. (741 aa) |
| | hypA | Hydrogenase nickel incorporation protein HypA; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase. (113 aa) |
| | LLO_2373 | Putative periplasmic binding protein; Equals llo2373. (313 aa) |
| | LLO_2372 | Putative NAD/NADP octopine/nopaline dehydrogenase; Equals llo2372. (352 aa) |
| | accD | Putative acetyl-CoA carboxylase beta subunit; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family. (287 aa) |
| | LLO_2337 | Putative DNA polymerase III, delta subunit; Equals llo2337. (341 aa) |
| | ycaJ | Recombination protein; Equals llo2322; conserved hypothetical protein. (431 aa) |
| | LLO_2305 | Hypothetical protein; Equals llo2304; Belongs to the transcriptional regulatory Fis family. (93 aa) |
| | gatA | Glutamyl-tRNA(Gln) amidotransferase (subunit A); Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln). (480 aa) |
| | LLO_2286 | Putative ABC transporter, permease component; Equals llo2286. (378 aa) |
| | LLO_2284 | Putative ABC transporter, ATP-binding protein; Equals llo2284. (319 aa) |
| | LLO_2283 | Hypothetical protein (C-terminal part); Equals llo2282c. (383 aa) |
| | yecS | Putative transporter subunit: permease component of ABC superfamily transporter; Equals llo2279; similar to amino acid ABC transporter permease. (212 aa) |
| | ugpE | Glycerol-3-phosphate transporter subunit; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane. (276 aa) |
| | ugpC | Glycerol-3-phosphate transporter subunit; Equals llo2261; similar to sn-glycerol-3-phosphate transport ATP-binding protein; Belongs to the ABC transporter superfamily. (362 aa) |
| | guaB | Putative IMP dehydrogenase/GMP reductase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. (490 aa) |
| | iolD | Equals llo2233; similar to malonic semialdehyde oxidative decarboxylase; Belongs to the TPP enzyme family. (623 aa) |
| | LLO_2215 | Equals llo2215; similar to hypothetical protein. (408 aa) |
| | LLO_2170 | Hypothetical protein; Equals llo2170. (268 aa) |
| | qxtA | Equals llo2120; similar to cytochrome d ubiquinol oxidase subunit I. (456 aa) |
| | LLO_2091 | Equals llo2091; similar to ABC transporter permease protein. (375 aa) |
| | accA | acetyl-CoA carboxylase carboxyl transferase subunit alpha; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA. (317 aa) |
| | LLO_2049 | Hypothetical protein; Equals llo2049. (109 aa) |
| | xseA | Exonuclease VII, large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family. (442 aa) |
| | trpG | Anthranilate synthase component II; Equals llo2028. (188 aa) |
| | lptB | Putative lipopolysaccharide transport protein B: ATP-binding component of ABC superfamily; Equals llo2027; similar to ABC transporter, ATP-binding protein. (241 aa) |
| | yrbE | Toluene transporter subunit: membrane component of ABC superfamily; Equals llo2021; similar to permease of ABC transporter. (260 aa) |
| | LLO_2017 | Equals llo2017; similar to conserved hypothetical protein; Belongs to the BolA/IbaG family. (81 aa) |
| | LLO_1987 | Equals llo1987; similar to UmuD protein; Belongs to the peptidase S24 family. (168 aa) |
| | hbpA | Bacterial extracellular solute-binding protein; Equals llo1932. (719 aa) |
| | LLO_1863 | Putative SOS (Error prone) mutagenesis protein UmuD; Equals llo1863; Belongs to the peptidase S24 family. (168 aa) |
| | LLO_1831 | Putative conjugative transfer protein TraI; Equals llo1831. (986 aa) |
| | gyrA | DNA gyrase, subunit A, type II topoisomerase; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP- [...] (866 aa) |
| | rpsA | 30S ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. (559 aa) |
| | aceE | Pyruvate dehydrogenase (decarboxylase component) E1p; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). (887 aa) |
| | aceF | Pyruvate dehydrogenase (dihydrolipoyltransacetylase component) E2p; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). (541 aa) |
| | rpsB | 30S ribosomal protein S2; Equals llo1720; Belongs to the universal ribosomal protein uS2 family. (253 aa) |
| | LLO_1673 | Equals llo1673; similar to unknown proteins. (110 aa) |
| | LLO_1671 | Putative amidase; Equals llo1671. (463 aa) |
| | LLO_1667 | Putative amidase; Equals llo1667. (578 aa) |
| | LLO_1607 | Putative Naringenin-chalcone synthase; Equals llo1607. (367 aa) |
| | LLO_1573 | Putative transmembrane protein; Equals llo1573. (635 aa) |
| | LLO_1533 | Equals llo1533; similar to conserved hypothetical protein. (224 aa) |
| | odp | Branched-chain alpha-keto acid dehydrogenase subunit E2; Equals llo1517; pyruvate dehydrogenase E2 (dihydrolipoamide acetyltransferase). (370 aa) |
| | ruvB | Putative Holliday junction DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. (338 aa) |
| | glpD | Glycerol-3-phosphate dehydrogenase; Equals llo1499; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family. (507 aa) |
| | LLO_1488 | Putative DNA polymerase III, delta' subunit; Equals llo1488. (304 aa) |
| | rpmF | 50S ribosomal subunit protein L32; Equals llo1479; Belongs to the bacterial ribosomal protein bL32 family. (63 aa) |
| | fis-2 | Global DNA-binding transcriptional dual regulator; Equals llo1460; similar to DNA-binding protein Fis; Belongs to the transcriptional regulatory Fis family. (99 aa) |
| | lspG | Type II secretory pathway protein LspG; Equals llo1448. (140 aa) |
| | lspH | Type II secretory pathway protein LspH; Equals llo1447. (165 aa) |
| | lspI | Type II secretory pathway protein LspI; Equals llo1446. (128 aa) |
| | lspJ | Type II secretory pathway protein LspJ; Equals llo1445. (212 aa) |
| | rir1 | Putative ribonucleoside-diphosphate reductase, alpha subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. (941 aa) |
| | LLO_1416 | Putative transcriptional regulator, ArsR family; Equals llo1416. (98 aa) |
| | LLO_1378 | Putative ABC transporter (permease); Equals llo1378. (252 aa) |
| | ytfH | Putative transcriptional regulator; Equals llo1368. (124 aa) |
| | poxB | Pyruvate dehydrogenase (pyruvate oxidase), thiamin-dependent, FAD-binding; Equals llo1357; Belongs to the TPP enzyme family. (575 aa) |
| | bamD | Putative competence lipoprotein comL precursor; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. (257 aa) |
| | clpX | ATP-dependent Clp protease ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP. (424 aa) |
| | LLO_1274 | Putative general secretion pathway protein L; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins. (378 aa) |
| | LLO_1273 | Putative general secretion pathway protein; Equals llo1273. (160 aa) |
| | LLO_1263 | Putative 6,7-dimethyl-8-ribityllumazine synthase (Riboflavinsynthase); Equals llo1263; Belongs to the DMRL synthase family. (142 aa) |
| | LLO_1262 | Putative 6,7-dimethyl-8-ribityllumazine synthase (Riboflavinsynthase); Equals llo1262; Belongs to the DMRL synthase family. (140 aa) |
| | LLO_1195 | Putative coiled-coil protein; Equals llo1195. (532 aa) |
| | lspD | Type II protein secretion LspD; Equals llo1186. (786 aa) |
| | qseB | DNA-binding response regulator in two-component regulatory system with QseC; Equals llo1159; similar to two component response regulator. (225 aa) |
| | ruvA | Holliday junction DNA helicase; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB. (198 aa) |
