(11 nodes) Amino acid ABC transporter, permease protein, 3-TM domain network (Vibrio alginolyticus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

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Known Interactions

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Predicted Interactions

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protein homology

Your Input:
	yhdY	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (365 aa)
	ANP64855.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (315 aa)
	glnM_2	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (246 aa)
	yxeN	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (223 aa)
	ANP67101.1	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (306 aa)
	glnM_3	Polar amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (265 aa)
	artM	Arginine transporter permease subunit ArtM; With ArtPQJI acts to transport arginine across the inner membrane; Derived by automated computational analysis using gene prediction method: Protein Homology. (222 aa)
	ANP67334.1	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (229 aa)
	ANP64824.1	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (401 aa)
	hisM	Amino acid ABC transporter permease; With HisJPQ is involved in transport of histidine, lysine, arginine and ornithine; Derived by automated computational analysis using gene prediction method: Protein Homology. (225 aa)
	hisQ	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (246 aa)

Your Current Organism:

Vibrio alginolyticus

NCBI taxonomy Id: 663
Other names: ATCC 17749, Beneckea alginolytica, CAIM 516, CCUG 13445, CCUG 16315, CCUG 4989, CIP 103336, CIP 75.3, DSM 2171, IFO 15630, LMG 4409, LMG:4409, NBRC 15630, NCCB 71013, NCCB 77003, NCTC 12160, Oceanomonas alginolytica, Pseudomonas creosotensis, V. alginolyticus, Vibrio sp. PeIg0901

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ANP64824.1	ANP64855.1	BAU10_07415	BAU10_07590	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.669
ANP64824.1	ANP67101.1	BAU10_07415	BAU10_19265	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.679
ANP64824.1	ANP67334.1	BAU10_07415	BAU10_20525	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.471
ANP64824.1	artM	BAU10_07415	BAU10_20520	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Arginine transporter permease subunit ArtM; With ArtPQJI acts to transport arginine across the inner membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.472
ANP64824.1	glnM_2	BAU10_07415	BAU10_15065	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.656
ANP64824.1	glnM_3	BAU10_07415	BAU10_19275	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Polar amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.689
ANP64824.1	hisM	BAU10_07415	BAU10_04010	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amino acid ABC transporter permease; With HisJPQ is involved in transport of histidine, lysine, arginine and ornithine; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.660
ANP64824.1	hisQ	BAU10_07415	BAU10_04005	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.468
ANP64824.1	yhdY	BAU10_07415	BAU10_07420	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.998
ANP64824.1	yxeN	BAU10_07415	BAU10_15170	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.657
ANP64855.1	ANP64824.1	BAU10_07590	BAU10_07415	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.669
ANP64855.1	ANP67101.1	BAU10_07590	BAU10_19265	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.553
ANP64855.1	ANP67334.1	BAU10_07590	BAU10_20525	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.514
ANP64855.1	artM	BAU10_07590	BAU10_20520	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Arginine transporter permease subunit ArtM; With ArtPQJI acts to transport arginine across the inner membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.501
ANP64855.1	glnM_2	BAU10_07590	BAU10_15065	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.432
ANP64855.1	glnM_3	BAU10_07590	BAU10_19275	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Polar amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.421
ANP64855.1	hisM	BAU10_07590	BAU10_04010	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amino acid ABC transporter permease; With HisJPQ is involved in transport of histidine, lysine, arginine and ornithine; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.485
ANP64855.1	hisQ	BAU10_07590	BAU10_04005	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.532
ANP64855.1	yhdY	BAU10_07590	BAU10_07420	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.666
ANP64855.1	yxeN	BAU10_07590	BAU10_15170	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.466

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