(7 nodes) Mixed, incl. Stem cell development, and Poly-purine tract binding network (Papilio xuthus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	RR46_13696	Zinc finger CCCH domain-containing protein 14. (943 aa)
	RR46_12058	Transportin-1. (875 aa)
	RR46_05714	Heterogeneous nuclear ribonucleoprotein 27C. (535 aa)
	RR46_03907	RNA-binding protein squid. (286 aa)
	RR46_06053	RNA-binding protein Musashi-like Rbp6. (92 aa)
	RR46_08019	RNA-binding protein Musashi-like Rbp6. (356 aa)
	RR46_06052	RNA-binding protein Musashi-like Rbp6. (194 aa)

Your Current Organism:

Papilio xuthus

NCBI taxonomy Id: 66420
Other names: Asian swallowtail, Chinese swallowtail, Chinese yellow swallowtail, P. xuthus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
RR46_03907	RR46_05714	A0A194Q1T7	A0A194PUV1	RNA-binding protein squid.	Heterogeneous nuclear ribonucleoprotein 27C.	0.948
RR46_03907	RR46_06052	A0A194Q1T7	A0A194QE64	RNA-binding protein squid.	RNA-binding protein Musashi-like Rbp6.	0.717
RR46_03907	RR46_06053	A0A194Q1T7	A0A194Q893	RNA-binding protein squid.	RNA-binding protein Musashi-like Rbp6.	0.717
RR46_03907	RR46_08019	A0A194Q1T7	A0A194Q9N2	RNA-binding protein squid.	RNA-binding protein Musashi-like Rbp6.	0.743
RR46_03907	RR46_12058	A0A194Q1T7	A0A194PQN1	RNA-binding protein squid.	Transportin-1.	0.653
RR46_03907	RR46_13696	A0A194Q1T7	A0A194PMX5	RNA-binding protein squid.	Zinc finger CCCH domain-containing protein 14.	0.764
RR46_05714	RR46_03907	A0A194PUV1	A0A194Q1T7	Heterogeneous nuclear ribonucleoprotein 27C.	RNA-binding protein squid.	0.948
RR46_05714	RR46_06052	A0A194PUV1	A0A194QE64	Heterogeneous nuclear ribonucleoprotein 27C.	RNA-binding protein Musashi-like Rbp6.	0.674
RR46_05714	RR46_08019	A0A194PUV1	A0A194Q9N2	Heterogeneous nuclear ribonucleoprotein 27C.	RNA-binding protein Musashi-like Rbp6.	0.837
RR46_05714	RR46_12058	A0A194PUV1	A0A194PQN1	Heterogeneous nuclear ribonucleoprotein 27C.	Transportin-1.	0.658
RR46_05714	RR46_13696	A0A194PUV1	A0A194PMX5	Heterogeneous nuclear ribonucleoprotein 27C.	Zinc finger CCCH domain-containing protein 14.	0.896
RR46_06052	RR46_03907	A0A194QE64	A0A194Q1T7	RNA-binding protein Musashi-like Rbp6.	RNA-binding protein squid.	0.717
RR46_06052	RR46_05714	A0A194QE64	A0A194PUV1	RNA-binding protein Musashi-like Rbp6.	Heterogeneous nuclear ribonucleoprotein 27C.	0.674
RR46_06052	RR46_08019	A0A194QE64	A0A194Q9N2	RNA-binding protein Musashi-like Rbp6.	RNA-binding protein Musashi-like Rbp6.	0.684
RR46_06052	RR46_12058	A0A194QE64	A0A194PQN1	RNA-binding protein Musashi-like Rbp6.	Transportin-1.	0.653
RR46_06052	RR46_13696	A0A194QE64	A0A194PMX5	RNA-binding protein Musashi-like Rbp6.	Zinc finger CCCH domain-containing protein 14.	0.896
RR46_06053	RR46_03907	A0A194Q893	A0A194Q1T7	RNA-binding protein Musashi-like Rbp6.	RNA-binding protein squid.	0.717
RR46_06053	RR46_12058	A0A194Q893	A0A194PQN1	RNA-binding protein Musashi-like Rbp6.	Transportin-1.	0.653
RR46_06053	RR46_13696	A0A194Q893	A0A194PMX5	RNA-binding protein Musashi-like Rbp6.	Zinc finger CCCH domain-containing protein 14.	0.896
RR46_08019	RR46_03907	A0A194Q9N2	A0A194Q1T7	RNA-binding protein Musashi-like Rbp6.	RNA-binding protein squid.	0.743