(12 nodes) Mixed, incl. Frs2-mediated activation, and Kinase associated domain 1 (KA1) network (Papilio xuthus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	RR46_01054	Non-specific serine/threonine protein kinase. (861 aa)
	RR46_14384	Upstream stimulatory factor 2. (248 aa)
	RR46_05776	Serine/threonine-protein kinase par-1. (639 aa)
	RR46_11767	14-3-3 protein zeta; Belongs to the 14-3-3 family. (307 aa)
	RR46_08805	Raf-like serine/threonine-protein kinase phl. (745 aa)
	RR46_11463	Kinase suppressor of Ras 2. (850 aa)
	RR46_11693	14-3-3 protein epsilon; Belongs to the 14-3-3 family. (262 aa)
	RR46_12355	Non-specific serine/threonine protein kinase. (1824 aa)
	RR46_02567	Dual specificity mitogen-activated protein kinase kinase dSOR1; Belongs to the protein kinase superfamily. (403 aa)
	RR46_08703	Connector enhancer of kinase suppressor of ras 2. (353 aa)
	RR46_01943	Ras-like protein 1. (125 aa)
	RR46_04185	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (364 aa)

Your Current Organism:

Papilio xuthus

NCBI taxonomy Id: 66420
Other names: Asian swallowtail, Chinese swallowtail, Chinese yellow swallowtail, P. xuthus

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
RR46_01054	RR46_01943	A0A0N0PA08	A0A194QG04	Non-specific serine/threonine protein kinase.	Ras-like protein 1.	0.664
RR46_01054	RR46_02567	A0A0N0PA08	A0A194Q2U1	Non-specific serine/threonine protein kinase.	Dual specificity mitogen-activated protein kinase kinase dSOR1; Belongs to the protein kinase superfamily.	0.739
RR46_01054	RR46_08703	A0A0N0PA08	A0A194QDX6	Non-specific serine/threonine protein kinase.	Connector enhancer of kinase suppressor of ras 2.	0.755
RR46_01054	RR46_08805	A0A0N0PA08	A0A194PPH7	Non-specific serine/threonine protein kinase.	Raf-like serine/threonine-protein kinase phl.	0.738
RR46_01054	RR46_11463	A0A0N0PA08	A0A194PX81	Non-specific serine/threonine protein kinase.	Kinase suppressor of Ras 2.	0.871
RR46_01054	RR46_11693	A0A0N0PA08	A0A194PXV4	Non-specific serine/threonine protein kinase.	14-3-3 protein epsilon; Belongs to the 14-3-3 family.	0.871
RR46_01054	RR46_11767	A0A0N0PA08	A0A194PP56	Non-specific serine/threonine protein kinase.	14-3-3 protein zeta; Belongs to the 14-3-3 family.	0.871
RR46_01943	RR46_01054	A0A194QG04	A0A0N0PA08	Ras-like protein 1.	Non-specific serine/threonine protein kinase.	0.664
RR46_01943	RR46_02567	A0A194QG04	A0A194Q2U1	Ras-like protein 1.	Dual specificity mitogen-activated protein kinase kinase dSOR1; Belongs to the protein kinase superfamily.	0.881
RR46_01943	RR46_04185	A0A194QG04	A0A194QI47	Ras-like protein 1.	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.915
RR46_01943	RR46_05776	A0A194QG04	A0A194PP49	Ras-like protein 1.	Serine/threonine-protein kinase par-1.	0.590
RR46_01943	RR46_08703	A0A194QG04	A0A194QDX6	Ras-like protein 1.	Connector enhancer of kinase suppressor of ras 2.	0.854
RR46_01943	RR46_08805	A0A194QG04	A0A194PPH7	Ras-like protein 1.	Raf-like serine/threonine-protein kinase phl.	0.992
RR46_01943	RR46_11463	A0A194QG04	A0A194PX81	Ras-like protein 1.	Kinase suppressor of Ras 2.	0.854
RR46_01943	RR46_11693	A0A194QG04	A0A194PXV4	Ras-like protein 1.	14-3-3 protein epsilon; Belongs to the 14-3-3 family.	0.732
RR46_01943	RR46_11767	A0A194QG04	A0A194PP56	Ras-like protein 1.	14-3-3 protein zeta; Belongs to the 14-3-3 family.	0.720
RR46_01943	RR46_12355	A0A194QG04	A0A194PYU2	Ras-like protein 1.	Non-specific serine/threonine protein kinase.	0.590
RR46_02567	RR46_01054	A0A194Q2U1	A0A0N0PA08	Dual specificity mitogen-activated protein kinase kinase dSOR1; Belongs to the protein kinase superfamily.	Non-specific serine/threonine protein kinase.	0.739
RR46_02567	RR46_01943	A0A194Q2U1	A0A194QG04	Dual specificity mitogen-activated protein kinase kinase dSOR1; Belongs to the protein kinase superfamily.	Ras-like protein 1.	0.881
RR46_02567	RR46_04185	A0A194Q2U1	A0A194QI47	Dual specificity mitogen-activated protein kinase kinase dSOR1; Belongs to the protein kinase superfamily.	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.947