30 items (Papilio xuthus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	RR46_07959	Glucose-6-phosphate isomerase; Belongs to the GPI family. (591 aa)
	RR46_06279	Fructose-1,6-bisphosphatase 1; Belongs to the FBPase class 1 family. (337 aa)
	RR46_13392	Bilin binding protein 3; Belongs to the calycin superfamily. Lipocalin family. (199 aa)
	RR46_02502	Glyceraldehyde-3-phosphate dehydrogenase. (332 aa)
	RR46_11310	Enolase. (433 aa)
	RR46_09988	D-erythrulose reductase. (244 aa)
	RR46_09987	L-xylulose reductase. (244 aa)
	RR46_09990	L-xylulose reductase. (244 aa)
	RR46_07651	Phosphoenolpyruvate carboxykinase [GTP]. (638 aa)
	RR46_09457	Aldose 1-epimerase. (259 aa)
	RR46_11698	Glucose dehydrogenase [acceptor]. (613 aa)
	RR46_08934	Phosphoglycerate kinase. (415 aa)
	RR46_12553	Uncharacterized protein. (311 aa)
	RR46_12508	Glucose-6-phosphatase. (361 aa)
	RR46_11721	Phosphorylase b kinase gamma catalytic chain, testis/liver isoform; Belongs to the protein kinase superfamily. (401 aa)
	RR46_06901	Triosephosphate isomerase. (248 aa)
	RR46_11873	ATP-dependent 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. ATP-dependent PFK group I subfamily. Eukaryotic two domain clade 'E' sub-subfamily. (782 aa)
	RR46_13093	Glucose-6-phosphate 1-dehydrogenase; Catalyzes the rate-limiting step of the oxidative pentose- phosphate pathway, which represents a route for the dissimilation of carbohydrates besides glycolysis. (493 aa)
	RR46_14409	Pyruvate carboxylase, mitochondrial. (1242 aa)
	RR46_13390	Bilin-binding protein; Belongs to the calycin superfamily. Lipocalin family. (225 aa)
	RR46_13389	Bilin-binding protein. (182 aa)
	RR46_13384	Lopap; Belongs to the calycin superfamily. Lipocalin family. (210 aa)
	RR46_08453	Aldose 1-epimerase. (478 aa)
	RR46_14673	Uncharacterized protein. (809 aa)
	RR46_14433	ADP-dependent glucokinase. (489 aa)
	RR46_00717	Fructose-1,6-bisphosphatase, chloroplastic. (50 aa)
	RR46_00879	Phosphotransferase. (595 aa)
	RR46_01465	GDP-D-glucose phosphorylase C15orf58-like. (442 aa)
	RR46_00216	Glucose-6-phosphatase 3. (181 aa)
	RR46_01561	Phosphotransferase. (456 aa)

Your Current Organism:

Papilio xuthus

NCBI taxonomy Id: 66420
Other names: Asian swallowtail, Chinese swallowtail, Chinese yellow swallowtail, P. xuthus

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
RR46_00216	RR46_00879	A0A0N1IMV0	A0A0N0P9H4	Glucose-6-phosphatase 3.	Phosphotransferase.	0.822
RR46_00216	RR46_01561	A0A0N1IMV0	A0A0N1IMZ8	Glucose-6-phosphatase 3.	Phosphotransferase.	0.822
RR46_00216	RR46_07651	A0A0N1IMV0	A0A194Q5I7	Glucose-6-phosphatase 3.	Phosphoenolpyruvate carboxykinase [GTP].	0.463
RR46_00216	RR46_07959	A0A0N1IMV0	A0A194QGY5	Glucose-6-phosphatase 3.	Glucose-6-phosphate isomerase; Belongs to the GPI family.	0.776
RR46_00216	RR46_11698	A0A0N1IMV0	A0A194PXW0	Glucose-6-phosphatase 3.	Glucose dehydrogenase [acceptor].	0.763
RR46_00216	RR46_13093	A0A0N1IMV0	A0A194PLQ8	Glucose-6-phosphatase 3.	Glucose-6-phosphate 1-dehydrogenase; Catalyzes the rate-limiting step of the oxidative pentose- phosphate pathway, which represents a route for the dissimilation of carbohydrates besides glycolysis.	0.796
RR46_00717	RR46_00879	A0A0N1PEZ1	A0A0N0P9H4	Fructose-1,6-bisphosphatase, chloroplastic.	Phosphotransferase.	0.849
RR46_00717	RR46_01561	A0A0N1PEZ1	A0A0N1IMZ8	Fructose-1,6-bisphosphatase, chloroplastic.	Phosphotransferase.	0.849
RR46_00717	RR46_02502	A0A0N1PEZ1	I4DIT9	Fructose-1,6-bisphosphatase, chloroplastic.	Glyceraldehyde-3-phosphate dehydrogenase.	0.671
RR46_00717	RR46_06901	A0A0N1PEZ1	A0A194PS77	Fructose-1,6-bisphosphatase, chloroplastic.	Triosephosphate isomerase.	0.627
RR46_00717	RR46_07651	A0A0N1PEZ1	A0A194Q5I7	Fructose-1,6-bisphosphatase, chloroplastic.	Phosphoenolpyruvate carboxykinase [GTP].	0.441
RR46_00717	RR46_07959	A0A0N1PEZ1	A0A194QGY5	Fructose-1,6-bisphosphatase, chloroplastic.	Glucose-6-phosphate isomerase; Belongs to the GPI family.	0.901
RR46_00717	RR46_08934	A0A0N1PEZ1	A0A194PWG7	Fructose-1,6-bisphosphatase, chloroplastic.	Phosphoglycerate kinase.	0.549
RR46_00717	RR46_11310	A0A0N1PEZ1	I4DJA8	Fructose-1,6-bisphosphatase, chloroplastic.	Enolase.	0.668
RR46_00717	RR46_11873	A0A0N1PEZ1	A0A194PQ53	Fructose-1,6-bisphosphatase, chloroplastic.	ATP-dependent 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. ATP-dependent PFK group I subfamily. Eukaryotic two domain clade 'E' sub-subfamily.	0.908
RR46_00717	RR46_13093	A0A0N1PEZ1	A0A194PLQ8	Fructose-1,6-bisphosphatase, chloroplastic.	Glucose-6-phosphate 1-dehydrogenase; Catalyzes the rate-limiting step of the oxidative pentose- phosphate pathway, which represents a route for the dissimilation of carbohydrates besides glycolysis.	0.598
RR46_00717	RR46_14409	A0A0N1PEZ1	A0A194PII9	Fructose-1,6-bisphosphatase, chloroplastic.	Pyruvate carboxylase, mitochondrial.	0.506
RR46_00717	RR46_14433	A0A0N1PEZ1	A0A194PE15	Fructose-1,6-bisphosphatase, chloroplastic.	ADP-dependent glucokinase.	0.842
RR46_00879	RR46_00216	A0A0N0P9H4	A0A0N1IMV0	Phosphotransferase.	Glucose-6-phosphatase 3.	0.822
RR46_00879	RR46_00717	A0A0N0P9H4	A0A0N1PEZ1	Phosphotransferase.	Fructose-1,6-bisphosphatase, chloroplastic.	0.849