(17 nodes) Synaptic vesicle docking network (Papilio xuthus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	RR46_10228	Exocyst complex component 8. (683 aa)
	RR46_13869	Exocyst complex component 3. (457 aa)
	RR46_13868	Exocyst complex component 3. (593 aa)
	RR46_13529	Exocyst complex component 5. (700 aa)
	RR46_15132	Syntaxin-1A; Belongs to the syntaxin family. (369 aa)
	RR46_14573	Exocyst complex component 7; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. (692 aa)
	RR46_01021	Uncharacterized protein. (184 aa)
	RR46_02629	Phorbol ester/diacylglycerol-binding protein unc-13. (1170 aa)
	RR46_10783	Exocyst complex component 2; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. Belongs to the SEC5 family. (885 aa)
	RR46_06938	Syntaxin-6. (189 aa)
	RR46_08201	Peripheral plasma membrane protein CASK; Belongs to the MAGUK family. (493 aa)
	RR46_06176	Syntaxin-16; Belongs to the syntaxin family. (337 aa)
	RR46_03569	t-SNARE domain-containing protein 1; Belongs to the syntaxin family. (276 aa)
	RR46_06299	Protein unc-13-like B. (2739 aa)
	RR46_02164	Syntaxin-1A. (348 aa)
	RR46_05198	Synaptobrevin. (124 aa)
	RR46_11268	Exocyst complex component 4. (447 aa)

Your Current Organism:

Papilio xuthus

NCBI taxonomy Id: 66420
Other names: Asian swallowtail, Chinese swallowtail, Chinese yellow swallowtail, P. xuthus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
RR46_01021	RR46_02164	A0A0N1IC52	A0A194QJ14	Uncharacterized protein.	Syntaxin-1A.	0.811
RR46_01021	RR46_05198	A0A0N1IC52	I4DJ59	Uncharacterized protein.	Synaptobrevin.	0.819
RR46_01021	RR46_06176	A0A0N1IC52	A0A194QBT5	Uncharacterized protein.	Syntaxin-16; Belongs to the syntaxin family.	0.689
RR46_01021	RR46_06938	A0A0N1IC52	A0A194PTX0	Uncharacterized protein.	Syntaxin-6.	0.981
RR46_01021	RR46_15132	A0A0N1IC52	A0A194PF28	Uncharacterized protein.	Syntaxin-1A; Belongs to the syntaxin family.	0.811
RR46_02164	RR46_01021	A0A194QJ14	A0A0N1IC52	Syntaxin-1A.	Uncharacterized protein.	0.811
RR46_02164	RR46_02629	A0A194QJ14	A0A194Q8I3	Syntaxin-1A.	Phorbol ester/diacylglycerol-binding protein unc-13.	0.803
RR46_02164	RR46_03569	A0A194QJ14	A0A194QD83	Syntaxin-1A.	t-SNARE domain-containing protein 1; Belongs to the syntaxin family.	0.794
RR46_02164	RR46_05198	A0A194QJ14	I4DJ59	Syntaxin-1A.	Synaptobrevin.	0.972
RR46_02164	RR46_06176	A0A194QJ14	A0A194QBT5	Syntaxin-1A.	Syntaxin-16; Belongs to the syntaxin family.	0.811
RR46_02164	RR46_06299	A0A194QJ14	A0A194QI63	Syntaxin-1A.	Protein unc-13-like B.	0.803
RR46_02164	RR46_06938	A0A194QJ14	A0A194PTX0	Syntaxin-1A.	Syntaxin-6.	0.852
RR46_02164	RR46_08201	A0A194QJ14	A0A194QAE5	Syntaxin-1A.	Peripheral plasma membrane protein CASK; Belongs to the MAGUK family.	0.951
RR46_02164	RR46_10228	A0A194QJ14	A0A194Q674	Syntaxin-1A.	Exocyst complex component 8.	0.563
RR46_02164	RR46_10783	A0A194QJ14	A0A194PKJ1	Syntaxin-1A.	Exocyst complex component 2; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. Belongs to the SEC5 family.	0.500
RR46_02164	RR46_11268	A0A194QJ14	A0A194PXU4	Syntaxin-1A.	Exocyst complex component 4.	0.538
RR46_02164	RR46_13529	A0A194QJ14	A0A194PGY6	Syntaxin-1A.	Exocyst complex component 5.	0.518
RR46_02164	RR46_14573	A0A194QJ14	A0A194PEF4	Syntaxin-1A.	Exocyst complex component 7; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.	0.577
RR46_02629	RR46_02164	A0A194Q8I3	A0A194QJ14	Phorbol ester/diacylglycerol-binding protein unc-13.	Syntaxin-1A.	0.803
RR46_02629	RR46_05198	A0A194Q8I3	I4DJ59	Phorbol ester/diacylglycerol-binding protein unc-13.	Synaptobrevin.	0.675