(9 nodes) Cdc73/Paf1 complex network (Papilio xuthus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	RR46_10518	Parafibromin. (568 aa)
	RR46_01457	RNA polymerase-associated protein Rtf1. (783 aa)
	RR46_00052	Uncharacterized protein. (102 aa)
	RR46_09566	WD repeat-containing protein 61. (329 aa)
	RR46_09420	RNA polymerase II-associated factor 1-like. (597 aa)
	RR46_09567	WD repeat-containing protein 61. (281 aa)
	RR46_06731	RNA polymerase-associated protein LEO1. (705 aa)
	RR46_11546	RNA polymerase-associated protein CTR9-like. (427 aa)
	RR46_11545	RNA polymerase-associated protein CTR9-like. (804 aa)

Your Current Organism:

Papilio xuthus

NCBI taxonomy Id: 66420
Other names: Asian swallowtail, Chinese swallowtail, Chinese yellow swallowtail, P. xuthus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
RR46_00052	RR46_06731	A0A0N0PF90	A0A194PT20	Uncharacterized protein.	RNA polymerase-associated protein LEO1.	0.984
RR46_00052	RR46_09420	A0A0N0PF90	A0A194PZN5	Uncharacterized protein.	RNA polymerase II-associated factor 1-like.	0.983
RR46_00052	RR46_09566	A0A0N0PF90	A0A194Q4L5	Uncharacterized protein.	WD repeat-containing protein 61.	0.872
RR46_00052	RR46_09567	A0A0N0PF90	A0A194PYD7	Uncharacterized protein.	WD repeat-containing protein 61.	0.872
RR46_00052	RR46_10518	A0A0N0PF90	A0A194PJQ3	Uncharacterized protein.	Parafibromin.	0.984
RR46_00052	RR46_11545	A0A0N0PF90	A0A194PR97	Uncharacterized protein.	RNA polymerase-associated protein CTR9-like.	0.971
RR46_00052	RR46_11546	A0A0N0PF90	A0A194PS92	Uncharacterized protein.	RNA polymerase-associated protein CTR9-like.	0.971
RR46_01457	RR46_06731	A0A0N1I9Z6	A0A194PT20	RNA polymerase-associated protein Rtf1.	RNA polymerase-associated protein LEO1.	0.984
RR46_01457	RR46_09420	A0A0N1I9Z6	A0A194PZN5	RNA polymerase-associated protein Rtf1.	RNA polymerase II-associated factor 1-like.	0.983
RR46_01457	RR46_09566	A0A0N1I9Z6	A0A194Q4L5	RNA polymerase-associated protein Rtf1.	WD repeat-containing protein 61.	0.872
RR46_01457	RR46_09567	A0A0N1I9Z6	A0A194PYD7	RNA polymerase-associated protein Rtf1.	WD repeat-containing protein 61.	0.872
RR46_01457	RR46_10518	A0A0N1I9Z6	A0A194PJQ3	RNA polymerase-associated protein Rtf1.	Parafibromin.	0.984
RR46_01457	RR46_11545	A0A0N1I9Z6	A0A194PR97	RNA polymerase-associated protein Rtf1.	RNA polymerase-associated protein CTR9-like.	0.971
RR46_01457	RR46_11546	A0A0N1I9Z6	A0A194PS92	RNA polymerase-associated protein Rtf1.	RNA polymerase-associated protein CTR9-like.	0.971
RR46_06731	RR46_00052	A0A194PT20	A0A0N0PF90	RNA polymerase-associated protein LEO1.	Uncharacterized protein.	0.984
RR46_06731	RR46_01457	A0A194PT20	A0A0N1I9Z6	RNA polymerase-associated protein LEO1.	RNA polymerase-associated protein Rtf1.	0.984
RR46_06731	RR46_09420	A0A194PT20	A0A194PZN5	RNA polymerase-associated protein LEO1.	RNA polymerase II-associated factor 1-like.	0.999
RR46_06731	RR46_09566	A0A194PT20	A0A194Q4L5	RNA polymerase-associated protein LEO1.	WD repeat-containing protein 61.	0.884
RR46_06731	RR46_09567	A0A194PT20	A0A194PYD7	RNA polymerase-associated protein LEO1.	WD repeat-containing protein 61.	0.884
RR46_06731	RR46_10518	A0A194PT20	A0A194PJQ3	RNA polymerase-associated protein LEO1.	Parafibromin.	0.999