(15 nodes) Basal cortex network (Papilio xuthus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	RR46_08505	Homeobox protein prospero. (273 aa)
	RR46_00283	CLIP-associating protein. (656 aa)
	RR46_00922	Guanine nucleotide exchange factor MSS4-like. (127 aa)
	RR46_15310	Maternal effect protein staufen. (119 aa)
	RR46_15311	Double-stranded RNA-binding protein Staufen-like 2. (758 aa)
	RR46_14884	Abl interactor 2. (423 aa)
	RR46_12706	CLIP-associating protein. (1540 aa)
	RR46_03050	Pleckstrin-likey-like domain family B member 1. (1396 aa)
	RR46_03191	B-box type zinc finger protein ncl-1. (936 aa)
	RR46_08506	Homeobox protein prospero. (736 aa)
	RR46_03051	Pleckstrin-likey-like domain family B member 2. (247 aa)
	RR46_06401	227 kDa spindle-and centromere-associated protein. (2819 aa)
	RR46_01712	Uncharacterized protein. (308 aa)
	RR46_01713	Heterogeneous nuclear ribonucleoprotein Q. (334 aa)
	RR46_01714	Heterogeneous nuclear ribonucleoprotein R. (276 aa)

Your Current Organism:

Papilio xuthus

NCBI taxonomy Id: 66420
Other names: Asian swallowtail, Chinese swallowtail, Chinese yellow swallowtail, P. xuthus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
RR46_01713	RR46_01714	A0A194QG02	A0A194QHD4	Heterogeneous nuclear ribonucleoprotein Q.	Heterogeneous nuclear ribonucleoprotein R.	0.928
RR46_01714	RR46_01713	A0A194QHD4	A0A194QG02	Heterogeneous nuclear ribonucleoprotein R.	Heterogeneous nuclear ribonucleoprotein Q.	0.928
RR46_03191	RR46_15310	A0A194Q7Q1	A0A194PEM2	B-box type zinc finger protein ncl-1.	Maternal effect protein staufen.	0.421
RR46_03191	RR46_15311	A0A194Q7Q1	A0A194PEV3	B-box type zinc finger protein ncl-1.	Double-stranded RNA-binding protein Staufen-like 2.	0.421
RR46_06401	RR46_15310	A0A194QE72	A0A194PEM2	227 kDa spindle-and centromere-associated protein.	Maternal effect protein staufen.	0.436
RR46_06401	RR46_15311	A0A194QE72	A0A194PEV3	227 kDa spindle-and centromere-associated protein.	Double-stranded RNA-binding protein Staufen-like 2.	0.436
RR46_08505	RR46_08506	A0A194Q7G7	A0A194Q7V0	Homeobox protein prospero.	Homeobox protein prospero.	0.587
RR46_08506	RR46_08505	A0A194Q7V0	A0A194Q7G7	Homeobox protein prospero.	Homeobox protein prospero.	0.587
RR46_15310	RR46_03191	A0A194PEM2	A0A194Q7Q1	Maternal effect protein staufen.	B-box type zinc finger protein ncl-1.	0.421
RR46_15310	RR46_06401	A0A194PEM2	A0A194QE72	Maternal effect protein staufen.	227 kDa spindle-and centromere-associated protein.	0.436
RR46_15311	RR46_03191	A0A194PEV3	A0A194Q7Q1	Double-stranded RNA-binding protein Staufen-like 2.	B-box type zinc finger protein ncl-1.	0.421
RR46_15311	RR46_06401	A0A194PEV3	A0A194QE72	Double-stranded RNA-binding protein Staufen-like 2.	227 kDa spindle-and centromere-associated protein.	0.436