(9 nodes) Site of double-strand break network (Papilio xuthus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	RR46_03443	Aprataxin and PNK-like factor. (445 aa)
	RR46_02684	Structural maintenance of chromosomes protein 6. (1041 aa)
	RR46_06135	Uncharacterized protein. (562 aa)
	RR46_11392	Uncharacterized protein. (138 aa)
	RR46_13924	E3 ubiquitin-protein ligase RNF8. (670 aa)
	RR46_10699	E3 ubiquitin-protein ligase RNF168. (632 aa)
	RR46_04510	Replication protein A 32 kDa subunit. (263 aa)
	RR46_08725	DNA damage-binding protein 1. (1096 aa)
	RR46_06248	Tumor suppressor p53-binding protein 1. (1210 aa)

Your Current Organism:

Papilio xuthus

NCBI taxonomy Id: 66420
Other names: Asian swallowtail, Chinese swallowtail, Chinese yellow swallowtail, P. xuthus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
RR46_02684	RR46_04510	A0A194QA37	A0A194PM92	Structural maintenance of chromosomes protein 6.	Replication protein A 32 kDa subunit.	0.469
RR46_02684	RR46_06248	A0A194QA37	A0A194QDP8	Structural maintenance of chromosomes protein 6.	Tumor suppressor p53-binding protein 1.	0.410
RR46_04510	RR46_02684	A0A194PM92	A0A194QA37	Replication protein A 32 kDa subunit.	Structural maintenance of chromosomes protein 6.	0.469
RR46_04510	RR46_06248	A0A194PM92	A0A194QDP8	Replication protein A 32 kDa subunit.	Tumor suppressor p53-binding protein 1.	0.608
RR46_04510	RR46_08725	A0A194PM92	A0A194PP99	Replication protein A 32 kDa subunit.	DNA damage-binding protein 1.	0.745
RR46_04510	RR46_11392	A0A194PM92	A0A194PSE6	Replication protein A 32 kDa subunit.	Uncharacterized protein.	0.997
RR46_06248	RR46_02684	A0A194QDP8	A0A194QA37	Tumor suppressor p53-binding protein 1.	Structural maintenance of chromosomes protein 6.	0.410
RR46_06248	RR46_04510	A0A194QDP8	A0A194PM92	Tumor suppressor p53-binding protein 1.	Replication protein A 32 kDa subunit.	0.608
RR46_06248	RR46_10699	A0A194QDP8	A0A194PL33	Tumor suppressor p53-binding protein 1.	E3 ubiquitin-protein ligase RNF168.	0.927
RR46_06248	RR46_13924	A0A194QDP8	A0A194PI24	Tumor suppressor p53-binding protein 1.	E3 ubiquitin-protein ligase RNF8.	0.888
RR46_08725	RR46_04510	A0A194PP99	A0A194PM92	DNA damage-binding protein 1.	Replication protein A 32 kDa subunit.	0.745
RR46_08725	RR46_11392	A0A194PP99	A0A194PSE6	DNA damage-binding protein 1.	Uncharacterized protein.	0.708
RR46_10699	RR46_06248	A0A194PL33	A0A194QDP8	E3 ubiquitin-protein ligase RNF168.	Tumor suppressor p53-binding protein 1.	0.927
RR46_10699	RR46_13924	A0A194PL33	A0A194PI24	E3 ubiquitin-protein ligase RNF168.	E3 ubiquitin-protein ligase RNF8.	0.806
RR46_11392	RR46_04510	A0A194PSE6	A0A194PM92	Uncharacterized protein.	Replication protein A 32 kDa subunit.	0.997
RR46_11392	RR46_08725	A0A194PSE6	A0A194PP99	Uncharacterized protein.	DNA damage-binding protein 1.	0.708
RR46_13924	RR46_06248	A0A194PI24	A0A194QDP8	E3 ubiquitin-protein ligase RNF8.	Tumor suppressor p53-binding protein 1.	0.888
RR46_13924	RR46_10699	A0A194PI24	A0A194PL33	E3 ubiquitin-protein ligase RNF8.	E3 ubiquitin-protein ligase RNF168.	0.806