(16 nodes) Tudor domain network (Papilio xuthus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	RR46_12633	RNA helicase-like protein. (1823 aa)
	RR46_08323	Staphylococcal nuclease domain-containing protein; Endonuclease that mediates miRNA decay of both protein-free and AGO2-loaded miRNAs. (894 aa)
	RR46_15013	A-kinase anchor protein 1, mitochondrial. (607 aa)
	RR46_11836	Survival of motor neuron-related-splicing factor 30. (239 aa)
	RR46_06248	Tumor suppressor p53-binding protein 1. (1210 aa)
	RR46_06230	Survival motor neuron protein. (208 aa)
	RR46_09871	Tudor domain-containing protein 1. (694 aa)
	RR46_08169	Tudor domain-containing protein. (308 aa)
	RR46_08134	Tudor and KH domain-containing protein. (595 aa)
	RR46_05269	Tudor domain-containing protein 3. (692 aa)
	RR46_10832	PHD finger protein 20-like protein 1. (1492 aa)
	RR46_13541	Putative ATP-dependent RNA helicase spindle-E. (1237 aa)
	RR46_11849	Tudor domain-containing protein 7. (1094 aa)
	RR46_09130	Maternal protein tudor. (2373 aa)
	RR46_03309	Tudor domain-containing protein 1. (1584 aa)
	RR46_07030	Uncharacterized protein. (702 aa)

Your Current Organism:

Papilio xuthus

NCBI taxonomy Id: 66420
Other names: Asian swallowtail, Chinese swallowtail, Chinese yellow swallowtail, P. xuthus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
RR46_03309	RR46_07030	A0A194Q4K1	A0A194Q606	Tudor domain-containing protein 1.	Uncharacterized protein.	0.449
RR46_03309	RR46_08134	A0A194Q4K1	A0A194QA36	Tudor domain-containing protein 1.	Tudor and KH domain-containing protein.	0.517
RR46_03309	RR46_12633	A0A194Q4K1	A0A194PUF0	Tudor domain-containing protein 1.	RNA helicase-like protein.	0.483
RR46_03309	RR46_13541	A0A194Q4K1	A0A194PMH8	Tudor domain-containing protein 1.	Putative ATP-dependent RNA helicase spindle-E.	0.677
RR46_03309	RR46_15013	A0A194Q4K1	A0A194PFN3	Tudor domain-containing protein 1.	A-kinase anchor protein 1, mitochondrial.	0.517
RR46_05269	RR46_08323	A0A194Q6K1	A0A194PF40	Tudor domain-containing protein 3.	Staphylococcal nuclease domain-containing protein; Endonuclease that mediates miRNA decay of both protein-free and AGO2-loaded miRNAs.	0.435
RR46_05269	RR46_11836	A0A194Q6K1	I4DJR4	Tudor domain-containing protein 3.	Survival of motor neuron-related-splicing factor 30.	0.514
RR46_06230	RR46_11836	A0A194QC82	I4DJR4	Survival motor neuron protein.	Survival of motor neuron-related-splicing factor 30.	0.531
RR46_06230	RR46_12633	A0A194QC82	A0A194PUF0	Survival motor neuron protein.	RNA helicase-like protein.	0.615
RR46_07030	RR46_03309	A0A194Q606	A0A194Q4K1	Uncharacterized protein.	Tudor domain-containing protein 1.	0.449
RR46_07030	RR46_08134	A0A194Q606	A0A194QA36	Uncharacterized protein.	Tudor and KH domain-containing protein.	0.485
RR46_07030	RR46_12633	A0A194Q606	A0A194PUF0	Uncharacterized protein.	RNA helicase-like protein.	0.601
RR46_07030	RR46_13541	A0A194Q606	A0A194PMH8	Uncharacterized protein.	Putative ATP-dependent RNA helicase spindle-E.	0.545
RR46_07030	RR46_15013	A0A194Q606	A0A194PFN3	Uncharacterized protein.	A-kinase anchor protein 1, mitochondrial.	0.485
RR46_08134	RR46_03309	A0A194QA36	A0A194Q4K1	Tudor and KH domain-containing protein.	Tudor domain-containing protein 1.	0.517
RR46_08134	RR46_07030	A0A194QA36	A0A194Q606	Tudor and KH domain-containing protein.	Uncharacterized protein.	0.485
RR46_08134	RR46_08323	A0A194QA36	A0A194PF40	Tudor and KH domain-containing protein.	Staphylococcal nuclease domain-containing protein; Endonuclease that mediates miRNA decay of both protein-free and AGO2-loaded miRNAs.	0.617
RR46_08134	RR46_09130	A0A194QA36	A0A194PW48	Tudor and KH domain-containing protein.	Maternal protein tudor.	0.485
RR46_08134	RR46_09871	A0A194QA36	A0A194QAV3	Tudor and KH domain-containing protein.	Tudor domain-containing protein 1.	0.485
RR46_08134	RR46_11849	A0A194QA36	A0A194PUN2	Tudor and KH domain-containing protein.	Tudor domain-containing protein 7.	0.485