STRINGSTRING
RR46_12130 RR46_12130 RR46_01077 RR46_01077 RR46_15192 RR46_15192 RR46_10441 RR46_10441 RR46_12129 RR46_12129 RR46_07519 RR46_07519
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RR46_12130Histone deacetylase 6. (558 aa)
RR46_01077Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (435 aa)
RR46_15192Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (484 aa)
RR46_10441Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (437 aa)
RR46_12129Histone deacetylase 6. (633 aa)
RR46_07519Histone deacetylase 11. (339 aa)
Your Current Organism:
Papilio xuthus
NCBI taxonomy Id: 66420
Other names: Asian swallowtail, Chinese swallowtail, Chinese yellow swallowtail, P. xuthus
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