STRINGSTRING
dppE dppE dppD1 dppD1 dppC1 dppC1 dppB1 dppB1 lacZ1 lacZ1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
dppEPutative ABC transporter, ATP-binding protein, TC 3.A.1.5.-The Peptide/Opine/Nickel Uptake Transporter (PepT) Family. (221 aa)
dppD1Putative ABC transport system, ATP-binding component, TC 3.A.1.5.-The Peptide/Opine/Nickel Uptake Transporter (PepT) Family. (289 aa)
dppC1Binding-protein-dependent transport systems inner membrane component, TC 3.A.1.5.-The Peptide/Opine/Nickel Uptake Transporter (PepT) Family. (283 aa)
dppB1Binding-protein-dependent transport systems inner membrane component, TC 3.A.1.5.-The Peptide/Opine/Nickel Uptake Transporter (PepT) Family. (351 aa)
lacZ1Beta-galactosidase/beta-glucuronidase, Glycoside hydrolase family 2. (522 aa)
Your Current Organism:
Erwinia amylovora
NCBI taxonomy Id: 665029
Other names: E. amylovora CFBP1430, Erwinia amylovora CFBP1430, Erwinia amylovora str. CFBP1430, Erwinia amylovora strain CFBP1430
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