STRINGSTRING
EAMY_2200 EAMY_2200 lrp lrp ybaO ybaO EAMY_0505 EAMY_0505 asnC asnC
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
EAMY_2200Bacterial regulatory proteins, AsnC/Lrp, AsnC family. (176 aa)
lrpBacterial regulatory proteins, AsnC family. (164 aa)
ybaOBacterial regulatory proteins, AsnC/Lrp, AsnC family. (157 aa)
EAMY_0505Bacterial regulatory proteins, AsnC/Lrp, AsnC family. (161 aa)
asnCBacterial regulatory proteins, AsnC/Lrp, AsnC family. (153 aa)
Your Current Organism:
Erwinia amylovora
NCBI taxonomy Id: 665029
Other names: E. amylovora CFBP1430, Erwinia amylovora CFBP1430, Erwinia amylovora str. CFBP1430, Erwinia amylovora strain CFBP1430
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