(2 nodes) Lipoprotein-releasing system transmembrane protein LolC/E network (Erwinia amylovora)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ycfW	Lipoprotein releasing system, transmembrane protein, LolC/E family, TC 3.A.1.125.1 Lipoprotein releasing system transmembrane protein lolE. (414 aa)
	ycfU	Lipoprotein releasing system, transmembrane protein, LolC/E family, TC 3.A.1.125.1 Lipoprotein-releasing system transmembrane protein lolC. (399 aa)

Your Current Organism:

Erwinia amylovora

NCBI taxonomy Id: 665029
Other names: E. amylovora CFBP1430, Erwinia amylovora CFBP1430, Erwinia amylovora str. CFBP1430, Erwinia amylovora strain CFBP1430

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ycfU	ycfW	EAMY_1522	EAMY_1524	Lipoprotein releasing system, transmembrane protein, LolC/E family, TC 3.A.1.125.1 Lipoprotein-releasing system transmembrane protein lolC.	Lipoprotein releasing system, transmembrane protein, LolC/E family, TC 3.A.1.125.1 Lipoprotein releasing system transmembrane protein lolE.	0.992
ycfW	ycfU	EAMY_1524	EAMY_1522	Lipoprotein releasing system, transmembrane protein, LolC/E family, TC 3.A.1.125.1 Lipoprotein releasing system transmembrane protein lolE.	Lipoprotein releasing system, transmembrane protein, LolC/E family, TC 3.A.1.125.1 Lipoprotein-releasing system transmembrane protein lolC.	0.992