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hrpN hrpN hrpX hrpX hrpL hrpL rpoN rpoN glnG glnG glnA glnA flhB1 flhB1 fliA1 fliA1 fliA3 fliA3 fliQ3 fliQ3 fliE3 fliE3 flhB3 flhB3 flhA3 flhA3 hfq hfq dspE dspE hrpS hrpS flhA1 flhA1 fliE1 fliE1 fliQ1 fliQ1 amtB amtB glnK glnK yhbH yhbH
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
hrpNHarpin HrpN (Harpin-Ech); Harpin protein, secreted. (391 aa)
hrpXTwo-component sensor kinase, ATP-binding region, ATPase-like, Histidine kinase, sensory_box: PAS domain S-box. (494 aa)
hrpLsigma70-ECF: RNA polymerase sigma factor, sigma-70 family. (182 aa)
rpoNRNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. (477 aa)
glnGTranscriptional regulatory protein glnG; Member of the two-component regulatory system NtrB/NtrC, which controls expression of the nitrogen-regulated (ntr) genes in response to nitrogen limitation. Phosphorylated NtrC binds directly to DNA and stimulates the formation of open promoter-sigma54-RNA polymerase complexes. (469 aa)
glnAGlutamine synthetase (Glutamate-ammonia ligase). (469 aa)
flhB1Flagellar biosynthetic protein FlhB; Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the type III secretion exporter family. (383 aa)
fliA1RNA polymerase sigma factor FliA/RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor controls the expression of flagella-related genes; Belongs to the sigma-70 factor family. FliA subfamily. (240 aa)
fliA3RNA polymerase sigma factor FliA/RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor controls the expression of flagella-related genes; Belongs to the sigma-70 factor family. FliA subfamily. (243 aa)
fliQ3Flagellar biosynthetic protein FliQ; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family. (89 aa)
fliE3fliE: flagellar hook-basal body complex protein. (110 aa)
flhB3Flagellar biosynthetic protein FlhB; Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the type III secretion exporter family. (381 aa)
flhA3Flagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family. (701 aa)
hfqProtein hfq (Host factor-I protein) (HF-I) (HF-1); RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family. (103 aa)
dspEPutative avirulence protein DspE (DspA); Hrp-secreted pathogenicity/avirulence protein. (1838 aa)
hrpSRNA polymerase sigma factor 54-dependent enhancer-binding protein HrpS. (324 aa)
flhA1Flagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family. (695 aa)
fliE1fliE: flagellar hook-basal body complex protein. (103 aa)
fliQ1Flagellar biosynthetic protein FliQ; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family. (89 aa)
amtBAmmonium transporter, TC 1.A.11.1.1 Ammonia channel. (433 aa)
glnKNitrogen regulatory PII-like, alpha/beta; Belongs to the P(II) protein family. (112 aa)
yhbHRibosomal protein S30Ae/sigma 54 modulation protein. (95 aa)
Your Current Organism:
Erwinia amylovora
NCBI taxonomy Id: 665029
Other names: E. amylovora CFBP1430, Erwinia amylovora CFBP1430, Erwinia amylovora str. CFBP1430, Erwinia amylovora strain CFBP1430
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