STRINGSTRING
SS1G_00052 SS1G_00052 SS1G_02960 SS1G_02960 SS1G_03559 SS1G_03559 SS1G_03856 SS1G_03856 SS1G_08407 SS1G_08407 SS1G_09865 SS1G_09865 SS1G_12760 SS1G_12760 SS1G_13261 SS1G_13261
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SS1G_00052TIP120 domain-containing protein. (1355 aa)
SS1G_02960E2_bind domain-containing protein. (443 aa)
SS1G_03559Defective in cullin neddylation protein; Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity. (273 aa)
SS1G_03856UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (197 aa)
SS1G_08407NEDD8-activating enzyme E1 regulatory subunit; Regulatory subunit of the dimeric UBA3-ULA1 E1 enzyme. (538 aa)
SS1G_09865Ubiquitin-like domain-containing protein. (143 aa)
SS1G_12760ULP_PROTEASE domain-containing protein. (260 aa)
SS1G_13261CULLIN_2 domain-containing protein; Belongs to the cullin family. (843 aa)
Your Current Organism:
Sclerotinia sclerotiorum
NCBI taxonomy Id: 665079
Other names: S. sclerotiorum 1980 UF-70, Sclerotinia sclerotiorum 1980 UF-70
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