STRINGSTRING
SS1G_00191 SS1G_00191 SS1G_00199 SS1G_00199 SS1G_00234 SS1G_00234 SS1G_00252 SS1G_00252 SS1G_00292 SS1G_00292 SS1G_00566 SS1G_00566 SS1G_00588 SS1G_00588 SS1G_00885 SS1G_00885 SS1G_00901 SS1G_00901 SS1G_00913 SS1G_00913 SS1G_00934 SS1G_00934 SS1G_01136 SS1G_01136 SS1G_01182 SS1G_01182 SS1G_01416 SS1G_01416 SS1G_01436 SS1G_01436 SS1G_01576 SS1G_01576 SS1G_01581 SS1G_01581 SS1G_01586 SS1G_01586 SS1G_01598 SS1G_01598 SS1G_01705 SS1G_01705 SS1G_02390 SS1G_02390 SS1G_02959 SS1G_02959 SS1G_03009 SS1G_03009 SS1G_03162 SS1G_03162 SS1G_03279 SS1G_03279 SS1G_03660 SS1G_03660 SS1G_03753 SS1G_03753 SS1G_04191 SS1G_04191 SS1G_04211 SS1G_04211 SS1G_04421 SS1G_04421 SS1G_04574 SS1G_04574 SS1G_04584 SS1G_04584 SS1G_04596 SS1G_04596 SS1G_04717 SS1G_04717 SS1G_04725 SS1G_04725 SS1G_04853 SS1G_04853 SS1G_04917 SS1G_04917 SS1G_04966 SS1G_04966 SS1G_05346 SS1G_05346 SS1G_05399 SS1G_05399 SS1G_05650 SS1G_05650 SS1G_05728 SS1G_05728 SS1G_05855 SS1G_05855 SS1G_05928 SS1G_05928 SS1G_05935 SS1G_05935 SS1G_06051 SS1G_06051 SS1G_06114 SS1G_06114 SS1G_06128 SS1G_06128 SS1G_06285 SS1G_06285 SS1G_06514 SS1G_06514 SS1G_06648 SS1G_06648 SS1G_06692 SS1G_06692 SS1G_06696 SS1G_06696 SS1G_06713 SS1G_06713 SS1G_06726 SS1G_06726 SS1G_07016 SS1G_07016 SS1G_07028 SS1G_07028 SS1G_07029 SS1G_07029 SS1G_07030 SS1G_07030 SS1G_07031 SS1G_07031 SS1G_07216 SS1G_07216 SS1G_07292 SS1G_07292 SS1G_07293 SS1G_07293 SS1G_07307 SS1G_07307 SS1G_07389 SS1G_07389 SS1G_07511 SS1G_07511 SS1G_07559 SS1G_07559 SS1G_07562 SS1G_07562 SS1G_07615 SS1G_07615 SS1G_07672 SS1G_07672 SS1G_07704 SS1G_07704 SS1G_07727 SS1G_07727 SS1G_07770 SS1G_07770 CHL1 CHL1 SS1G_07980 SS1G_07980 SS1G_08079 SS1G_08079 SS1G_08274 SS1G_08274 SS1G_08369 SS1G_08369 SS1G_08475 SS1G_08475 SS1G_08504 SS1G_08504 SS1G_08915 SS1G_08915 SS1G_08937 SS1G_08937 SS1G_09317 SS1G_09317 SS1G_09569 SS1G_09569 SS1G_09604 SS1G_09604 SS1G_09606 SS1G_09606 SS1G_09612 SS1G_09612 SS1G_09615 SS1G_09615 SS1G_09739 SS1G_09739 SS1G_09864 SS1G_09864 SS1G_10253 SS1G_10253 SS1G_10539 SS1G_10539 SS1G_10770 SS1G_10770 SS1G_10772 SS1G_10772 SS1G_10790 SS1G_10790 SS1G_11264 SS1G_11264 SS1G_11654 SS1G_11654 SS1G_12234 SS1G_12234 SS1G_12247 SS1G_12247 SS1G_11815 SS1G_11815 SS1G_11854 SS1G_11854 SS1G_11915 SS1G_11915 SS1G_12621 SS1G_12621 SS1G_13156 SS1G_13156 SS1G_13157 SS1G_13157 SS1G_13191 SS1G_13191 SS1G_13364 SS1G_13364 SS1G_13366 SS1G_13366 SS1G_13425 SS1G_13425 SS1G_13670 SS1G_13670 SS1G_13927 SS1G_13927 SS1G_13928 SS1G_13928 SS1G_14461 SS1G_14461
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SS1G_00191Transcription elongation factor 1 homolog; Transcription elongation factor implicated in the maintenance of proper chromatin structure in actively transcribed regions. Belongs to the ELOF1 family. (139 aa)
SS1G_00199Protein kinase domain-containing protein. (581 aa)
SS1G_00234Uncharacterized protein. (488 aa)
SS1G_00252Uncharacterized protein. (449 aa)
SS1G_00292DUF4211 domain-containing protein. (755 aa)
SS1G_00566Transcription elongation factor SPT4; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. (117 aa)
SS1G_00588RNA_pol_L_2 domain-containing protein. (86 aa)
SS1G_00885DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1267 aa)
SS1G_00901Uncharacterized protein. (334 aa)
SS1G_00913Uncharacterized protein. (71 aa)
SS1G_00934Uncharacterized protein. (320 aa)
SS1G_01136TFIIB-type domain-containing protein. (350 aa)
SS1G_01182PHD domain-containing protein. (811 aa)
SS1G_01416Uncharacterized protein. (363 aa)
SS1G_01436Uncharacterized protein. (574 aa)
SS1G_01576Tyrosinase_Cu-bd domain-containing protein. (602 aa)
SS1G_01581CYCLIN domain-containing protein. (708 aa)
SS1G_01586Uncharacterized protein. (2663 aa)
SS1G_01598RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (585 aa)
SS1G_01705RNA_pol_Rbc25 domain-containing protein. (172 aa)
SS1G_02390Skp1_POZ domain-containing protein; Belongs to the SKP1 family. (102 aa)
SS1G_02959RPOLD domain-containing protein. (387 aa)
SS1G_03009Uncharacterized protein. (242 aa)
SS1G_03162Uncharacterized protein. (346 aa)
SS1G_03279TFIIS N-terminal domain-containing protein. (458 aa)
SS1G_03660Uncharacterized protein. (356 aa)
SS1G_03753DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1230 aa)
SS1G_04191Uncharacterized protein. (463 aa)
SS1G_04211Uncharacterized protein. (715 aa)
SS1G_04421Uncharacterized protein. (584 aa)
SS1G_04574Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. (1084 aa)
SS1G_04584HMG box domain-containing protein. (554 aa)
SS1G_04596RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (420 aa)
SS1G_04717RING-type domain-containing protein. (362 aa)
SS1G_04725Uncharacterized protein. (593 aa)
SS1G_04853Uncharacterized protein. (1031 aa)
SS1G_04917Uncharacterized protein. (1581 aa)
SS1G_04966Plus3 domain-containing protein. (627 aa)
SS1G_05346RPOLD domain-containing protein. (335 aa)
SS1G_05399DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (123 aa)
SS1G_05650Uncharacterized protein. (1524 aa)
SS1G_05728Uncharacterized protein. (475 aa)
SS1G_05855Uncharacterized protein. (200 aa)
SS1G_05928DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1746 aa)
SS1G_05935Uncharacterized protein. (643 aa)
SS1G_06051Serine/threonine-protein kinase; Belongs to the protein kinase superfamily. (400 aa)
SS1G_06114RNA_pol_L_2 domain-containing protein. (124 aa)
SS1G_06128DUF3591 domain-containing protein. (1089 aa)
SS1G_06285DNA-directed RNA polymerase III subunit RPC6; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs; Belongs to the eukaryotic RPC34/RPC39 RNA polymerase subunit family. (370 aa)
SS1G_06514Uncharacterized protein. (522 aa)
SS1G_06648Uncharacterized protein. (581 aa)
SS1G_06692Uncharacterized protein. (435 aa)
SS1G_06696TATA-box binding protein. (251 aa)
SS1G_06713Uncharacterized protein. (182 aa)
SS1G_06726Uncharacterized protein. (99 aa)
SS1G_07016Uncharacterized protein. (1016 aa)
SS1G_07028Uncharacterized protein. (122 aa)
SS1G_07029Uncharacterized protein. (141 aa)
SS1G_07030Uncharacterized protein. (157 aa)
SS1G_07031Uncharacterized protein. (171 aa)
SS1G_07216FACT complex subunit POB3; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment of [...] (302 aa)
SS1G_07292CYCLIN domain-containing protein; Belongs to the cyclin family. (383 aa)
SS1G_07293Uncharacterized protein. (828 aa)
SS1G_07307Uncharacterized protein. (165 aa)
SS1G_07389Uncharacterized protein. (817 aa)
SS1G_07511Git3 domain-containing protein. (263 aa)
SS1G_07559CYCLIN domain-containing protein; Belongs to the cyclin family. (427 aa)
SS1G_07562Uncharacterized protein. (272 aa)
SS1G_07615General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family. (479 aa)
SS1G_07672Protein kinase domain-containing protein. (1071 aa)
SS1G_07704Uncharacterized protein. (847 aa)
SS1G_07727CDC73_C domain-containing protein. (421 aa)
SS1G_07770Uncharacterized protein. (167 aa)
CHL1ATP-dependent DNA helicase CHL1; ATP-dependent DNA helicase important for chromosome transmission and normal cell cycle progression in G(2)/M (By similarity). May have a role in changing DNA topology to allow the loading of proteins involved in maintaining sister chromatid cohesion in the vicinity of the centromeres (By similarity). Has a specific role in chromosome segregation during meiosis II (By similarity). (902 aa)
SS1G_07980RNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II. (806 aa)
SS1G_08079RPOL4c domain-containing protein. (146 aa)
SS1G_08274RTR1-type domain-containing protein. (311 aa)
SS1G_08369Uncharacterized protein. (334 aa)
SS1G_08475DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (151 aa)
SS1G_08504Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (97 aa)
SS1G_08915HTH TFE/IIEalpha-type domain-containing protein. (449 aa)
SS1G_08937RPOL9 domain-containing protein. (119 aa)
SS1G_09317Uncharacterized protein. (988 aa)
SS1G_09569Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...] (192 aa)
SS1G_09604DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1705 aa)
SS1G_09606Helicase ATP-binding domain-containing protein. (616 aa)
SS1G_09612TAF domain-containing protein. (469 aa)
SS1G_09615Nitroreductase domain-containing protein. (266 aa)
SS1G_09739SAP30_Sin3_bdg domain-containing protein. (187 aa)
SS1G_09864Uncharacterized protein. (400 aa)
SS1G_10253Repressor of RNA polymerase III transcription MAF1; Mediator of diverse signals that repress RNA polymerase III transcription. Inhibits the de novo assembly of TFIIIB onto DNA. Belongs to the MAF1 family. (409 aa)
SS1G_10539DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1459 aa)
SS1G_10770Uncharacterized protein. (281 aa)
SS1G_10772Uncharacterized protein. (141 aa)
SS1G_10790Transcription elongation factor Spt6; Plays a role in maintenance of chromatin structure during RNA polymerase II transcription elongation thereby repressing transcription initiation from cryptic promoters. Mediates the reassembly of nucleosomes onto the promoters of at least a selected set of genes during repression; the nucleosome reassembly is essential for transcriptional repression; Belongs to the SPT6 family. (1408 aa)
SS1G_11264TFIID_20kDa domain-containing protein. (705 aa)
SS1G_11654Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. (297 aa)
SS1G_12234RPOL4c domain-containing protein. (167 aa)
SS1G_12247Transcription elongation factor s-ii. (301 aa)
SS1G_11815Uncharacterized protein. (501 aa)
SS1G_11854TFIIS-type domain-containing protein. (95 aa)
SS1G_11915Acyl_transf_3 domain-containing protein. (448 aa)
SS1G_12621Myb_DNA-bind_7 domain-containing protein. (658 aa)
SS1G_13156Uncharacterized protein. (359 aa)
SS1G_13157DNA-directed RNA polymerase III subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs. (244 aa)
SS1G_13191Uncharacterized protein. (288 aa)
SS1G_13364Uncharacterized protein. (636 aa)
SS1G_13366DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1165 aa)
SS1G_13425Uncharacterized protein. (356 aa)
SS1G_13670Uncharacterized protein. (303 aa)
SS1G_13927TAFII55_N domain-containing protein. (533 aa)
SS1G_13928BTP domain-containing protein. (130 aa)
SS1G_14461Tyrosinase. (672 aa)
Your Current Organism:
Sclerotinia sclerotiorum
NCBI taxonomy Id: 665079
Other names: S. sclerotiorum 1980 UF-70, Sclerotinia sclerotiorum 1980 UF-70
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