STRINGSTRING
SS1G_00048 SS1G_00048 SS1G_02009 SS1G_02009 SS1G_03477 SS1G_03477 SS1G_06759 SS1G_06759 SS1G_09764 SS1G_09764 SS1G_11816 SS1G_11816
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SS1G_00048Glycine cleavage system H protein; The H protein shuttles the methylamine group of glycine from the P protein to the T protein; Belongs to the GcvH family. (174 aa)
SS1G_02009Methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family. (663 aa)
SS1G_03477Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine. (1073 aa)
SS1G_06759Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine; Belongs to the GcvT family. (475 aa)
SS1G_09764Methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family. (590 aa)
SS1G_11816Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. (477 aa)
Your Current Organism:
Sclerotinia sclerotiorum
NCBI taxonomy Id: 665079
Other names: S. sclerotiorum 1980 UF-70, Sclerotinia sclerotiorum 1980 UF-70
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