STRINGSTRING
SS1G_07873 SS1G_07873 SS1G_07883 SS1G_07883 SS1G_08220 SS1G_08220 SS1G_08245 SS1G_08245 dbp10 dbp10 dbp4 dbp4 SS1G_08346 SS1G_08346 SS1G_08391 SS1G_08391 SS1G_08471 SS1G_08471 SS1G_08606 SS1G_08606 SS1G_08782 SS1G_08782 SS1G_08802 SS1G_08802 SS1G_08841 SS1G_08841 SS1G_08863 SS1G_08863 SS1G_09027 SS1G_09027 SS1G_09035 SS1G_09035 SS1G_09162 SS1G_09162 SS1G_09201 SS1G_09201 SS1G_09279 SS1G_09279 SS1G_09390 SS1G_09390 SS1G_09451 SS1G_09451 SS1G_09485 SS1G_09485 SS1G_09558 SS1G_09558 SS1G_09570 SS1G_09570 SS1G_09678 SS1G_09678 SS1G_09680 SS1G_09680 mrh4 mrh4 SS1G_09783 SS1G_09783 SS1G_09888 SS1G_09888 SS1G_10075 SS1G_10075 SS1G_10150 SS1G_10150 SS1G_10239 SS1G_10239 SS1G_10258 SS1G_10258 SS1G_10273 SS1G_10273 SS1G_10506 SS1G_10506 SS1G_10516 SS1G_10516 SS1G_10519 SS1G_10519 dbp3 dbp3 SS1G_10584 SS1G_10584 SS1G_10614 SS1G_10614 SS1G_10739 SS1G_10739 SS1G_10742 SS1G_10742 SS1G_10804 SS1G_10804 utp25 utp25 SS1G_10963 SS1G_10963 SS1G_10974 SS1G_10974 SS1G_10998 SS1G_10998 SS1G_10999 SS1G_10999 SS1G_11106 SS1G_11106 SS1G_11283 SS1G_11283 SS1G_11408 SS1G_11408 SS1G_11556 SS1G_11556 SS1G_11612 SS1G_11612 SS1G_08825 SS1G_08825 SS1G_00005 SS1G_00005 SS1G_00022 SS1G_00022 dbp8 dbp8 SS1G_00062 SS1G_00062 SS1G_00063 SS1G_00063 SS1G_00065 SS1G_00065 dbp2 dbp2 SS1G_00088 SS1G_00088 SS1G_00090 SS1G_00090 SS1G_00145 SS1G_00145 SS1G_00185 SS1G_00185 SS1G_00209 SS1G_00209 rrp36 rrp36 SS1G_00260 SS1G_00260 SS1G_00317 SS1G_00317 SS1G_00535 SS1G_00535 SS1G_00639 SS1G_00639 SS1G_00678 SS1G_00678 nop16 nop16 SS1G_00825 SS1G_00825 SS1G_00972 SS1G_00972 SS1G_00987 SS1G_00987 SS1G_00995 SS1G_00995 SS1G_01347 SS1G_01347 SS1G_01351 SS1G_01351 SS1G_01405 SS1G_01405 SS1G_01406 SS1G_01406 SS1G_01408 SS1G_01408 SS1G_01551 SS1G_01551 SS1G_01560 SS1G_01560 SS1G_01564 SS1G_01564 SS1G_01708 SS1G_01708 SS1G_01822 SS1G_01822 SS1G_01880 SS1G_01880 SS1G_01881 SS1G_01881 SS1G_02092 SS1G_02092 SS1G_02099 SS1G_02099 SS1G_02102 SS1G_02102 SS1G_02207 SS1G_02207 SS1G_02235 SS1G_02235 SS1G_02284 SS1G_02284 SS1G_02337 SS1G_02337 mak5 mak5 SS1G_02839 SS1G_02839 SS1G_02840 SS1G_02840 SS1G_02902 SS1G_02902 SS1G_02985 SS1G_02985 SS1G_03057 SS1G_03057 SS1G_03073 SS1G_03073 SS1G_03075 SS1G_03075 ytm1 ytm1 SS1G_03089 SS1G_03089 SS1G_03095 SS1G_03095 SS1G_03105 SS1G_03105 SS1G_03117 SS1G_03117 SS1G_03118 SS1G_03118 SS1G_03122 SS1G_03122 SS1G_03256 SS1G_03256 SS1G_03354 SS1G_03354 SS1G_03471 SS1G_03471 SS1G_03570 SS1G_03570 SS1G_03571 SS1G_03571 SS1G_03766 SS1G_03766 SS1G_03815 SS1G_03815 SS1G_03872 SS1G_03872 SS1G_03893 SS1G_03893 SS1G_03952 SS1G_03952 SS1G_04046 SS1G_04046 SS1G_04139 SS1G_04139 SS1G_04161 SS1G_04161 pxr1 pxr1 nop7 nop7 SS1G_04436 SS1G_04436 SS1G_04983 SS1G_04983 SS1G_05011 SS1G_05011 SS1G_05012 SS1G_05012 ipi1 ipi1 SS1G_05099 SS1G_05099 SS1G_05100 SS1G_05100 SS1G_05101 SS1G_05101 SS1G_05265 SS1G_05265 SS1G_05306 SS1G_05306 SS1G_05411 SS1G_05411 SS1G_05501 SS1G_05501 SS1G_05631 SS1G_05631 SS1G_05668 SS1G_05668 LSM5 LSM5 SS1G_05744 SS1G_05744 SS1G_05854 SS1G_05854 SS1G_05919 SS1G_05919 SS1G_06193 SS1G_06193 dbp9 dbp9 fal1 fal1 SS1G_06475 SS1G_06475 SS1G_06488 SS1G_06488 SS1G_06566 SS1G_06566 rrp3 rrp3 SS1G_06617 SS1G_06617 ERB1 ERB1 SS1G_06675 SS1G_06675 SS1G_06745 SS1G_06745 LSM8 LSM8 SS1G_06835 SS1G_06835 SS1G_07202 SS1G_07202 efg1 efg1 SS1G_07363 SS1G_07363 SS1G_07406 SS1G_07406 SS1G_07469 SS1G_07469 SS1G_07544 SS1G_07544 SS1G_07557 SS1G_07557 SS1G_07676 SS1G_07676 SS1G_07700 SS1G_07700 SS1G_07712 SS1G_07712 SS1G_07742 SS1G_07742 SS1G_07800 SS1G_07800 SS1G_07872 SS1G_07872 SS1G_12042 SS1G_12042 SS1G_12077 SS1G_12077 NAT10 NAT10 NOP58 NOP58 spb4 spb4 SS1G_12242 SS1G_12242 SS1G_12340 SS1G_12340 SS1G_11736 SS1G_11736 TSR3 TSR3 SS1G_11809 SS1G_11809 SS1G_11814 SS1G_11814 SS1G_11824 SS1G_11824 SS1G_11873 SS1G_11873 SS1G_11882 SS1G_11882 SS1G_12458 SS1G_12458 SS1G_12477 SS1G_12477 SS1G_12483 SS1G_12483 drs1 drs1 SS1G_12551 SS1G_12551 SS1G_12767 SS1G_12767 lsm6 lsm6 SS1G_12994 SS1G_12994 SS1G_13164 SS1G_13164 LSM4 LSM4 SS1G_13258 SS1G_13258 SS1G_13259 SS1G_13259 SS1G_13336 SS1G_13336 SS1G_13542 SS1G_13542 SS1G_13558 SS1G_13558 SS1G_13585 SS1G_13585 SS1G_13815 SS1G_13815 SS1G_13816 SS1G_13816 SS1G_13858 SS1G_13858 SS1G_13924 SS1G_13924 dbp7 dbp7 SS1G_14068 SS1G_14068 SS1G_14069 SS1G_14069 SS1G_14112 SS1G_14112 SS1G_14124 SS1G_14124 SS1G_14217 SS1G_14217 SS1G_14329 SS1G_14329 SS1G_14344 SS1G_14344
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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SS1G_0787320S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family. (455 aa)
SS1G_07883Exonuclease domain-containing protein. (772 aa)
SS1G_08220Bms1-type G domain-containing protein. (1129 aa)
SS1G_08245Uncharacterized protein. (1136 aa)
dbp10ATP-dependent RNA helicase dbp10; ATP-binding RNA helicase involved in the biogenesis of 60S ribosomal subunits and is required for the normal formation of 25S and 5.8S rRNAs; Belongs to the DEAD box helicase family. DDX54/DBP10 subfamily. (920 aa)
dbp4ATP-dependent RNA helicase dbp4; ATP-dependent RNA helicase required for ribosome biogenesis. Involved in the release of U14 snoRNA in pre-ribosomal complexes. Required for pre-rRNA cleavage at site A2 (By similarity). (808 aa)
SS1G_08346Ribonuclease P protein subunit. (231 aa)
SS1G_08391Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. (437 aa)
SS1G_08471RNase_PH domain-containing protein. (317 aa)
SS1G_08606RIO domain-containing protein. (432 aa)
SS1G_08782Protein MAK16; Belongs to the MAK16 family. (324 aa)
SS1G_08802BTB domain-containing protein. (295 aa)
SS1G_08841Uncharacterized protein. (1306 aa)
SS1G_08863Uncharacterized protein. (603 aa)
SS1G_09027Uncharacterized protein. (245 aa)
SS1G_09035Uncharacterized protein. (753 aa)
SS1G_09162WD_REPEATS_REGION domain-containing protein. (450 aa)
SS1G_09201Uncharacterized protein. (208 aa)
SS1G_09279Uncharacterized protein. (209 aa)
SS1G_09390Uncharacterized protein. (1035 aa)
SS1G_09451Uncharacterized protein. (181 aa)
SS1G_09485HIT-type domain-containing protein. (377 aa)
SS1G_09558Uncharacterized protein. (201 aa)
SS1G_09570Uncharacterized protein. (760 aa)
SS1G_09678Midasin; Nuclear chaperone required for maturation and nuclear export of pre-60S ribosome subunits; Belongs to the midasin family. (4951 aa)
SS1G_09680Nucleolar complex-associated protein 3; Required for synthesis of 60S ribosomal subunits and the transport of pre-ribosomes from the nucleoplasm to the cytoplasm. Belongs to the CBF/MAK21 family. (675 aa)
mrh4ATP-dependent RNA helicase mrh4, mitochondrial; ATP-binding RNA helicase involved in mitochondrial RNA metabolism. Required for maintenance of mitochondrial DNA (By similarity); Belongs to the DEAD box helicase family. MRH4 subfamily. (615 aa)
SS1G_09783KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (349 aa)
SS1G_09888WD_REPEATS_REGION domain-containing protein. (588 aa)
SS1G_10075Uncharacterized protein. (821 aa)
SS1G_10150RNA helicase. (573 aa)
SS1G_10239Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (128 aa)
SS1G_10258Uncharacterized protein. (260 aa)
SS1G_10273Exonuclease domain-containing protein. (456 aa)
SS1G_10506Uncharacterized protein. (235 aa)
SS1G_10516Uncharacterized protein. (595 aa)
SS1G_10519Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (224 aa)
dbp3ATP-dependent RNA helicase dbp3; ATP-dependent RNA helicase required for 60S ribosomal subunit synthesis. Involved in efficient pre-rRNA processing, predominantly at site A3, which is necessary for the normal formation of 25S and 5.8S rRNAs (By similarity); Belongs to the DEAD box helicase family. DDX5/DBP2 subfamily. (596 aa)
SS1G_10584FtsJ domain-containing protein. (281 aa)
SS1G_10614Uncharacterized protein. (694 aa)
SS1G_1073940S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family. (204 aa)
SS1G_10742Uncharacterized protein. (396 aa)
SS1G_10804S1 domain-containing protein. (328 aa)
utp25U3 small nucleolar RNA-associated protein 25; DEAD-box RNA helicase-like protein required for pre-18S rRNA processing, specifically at sites A0, A1, and A2. (724 aa)
SS1G_10963Uncharacterized protein. (537 aa)
SS1G_10974H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. (215 aa)
SS1G_10998PDCD2_C domain-containing protein. (410 aa)
SS1G_10999U3 small nucleolar RNA-associated protein 22. (1073 aa)
SS1G_11106Uncharacterized protein. (250 aa)
SS1G_11283Uncharacterized protein. (710 aa)
SS1G_11408Uncharacterized protein. (82 aa)
SS1G_11556Uncharacterized protein. (389 aa)
SS1G_11612Sm domain-containing protein. (74 aa)
SS1G_08825PUA domain-containing protein. (483 aa)
SS1G_0000560S ribosomal protein L7. (249 aa)
SS1G_0002225S rRNA adenine-N(1) methyltransferase; S-adenosyl-L-methionine-dependent methyltransferase that specifically methylates the N(1) position of an adenine present in helix 65 in 25S rRNA; Belongs to the BMT2 family. (290 aa)
dbp8ATP-dependent RNA helicase dbp8; ATP-binding RNA helicase involved in 40S ribosomal subunit biogenesis and is required for the normal formation of 18S rRNAs through pre-rRNA processing at A0, A1 and A2 sites. Required for vegetative growth (By similarity); Belongs to the DEAD box helicase family. DDX49/DBP8 subfamily. (540 aa)
SS1G_00062Uncharacterized protein. (560 aa)
SS1G_00063TRUD domain-containing protein. (1084 aa)
SS1G_00065Peptidyl-prolyl cis-trans isomerase. (77 aa)
dbp2ATP-dependent RNA helicase dbp2; ATP-dependent RNA helicase involved nonsense-mediated mRNA decay and ribosome biogenesis through rRNA processing. (572 aa)
SS1G_0008840S ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family. (143 aa)
SS1G_0009040S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family. (150 aa)
SS1G_0014540S ribosomal protein S3aE. (261 aa)
SS1G_00185Fcf2 domain-containing protein. (219 aa)
SS1G_00209Adenylate kinase isoenzyme 6 homolog; Broad-specificity nucleoside monophosphate (NMP) kinase that catalyzes the reversible transfer of the terminal phosphate group between nucleoside triphosphates and monophosphates. Has also ATPase activity. May be involved in rRNA maturation and transcription regulation. (179 aa)
rrp36rRNA biogenesis protein rrp36; Component of the 90S pre-ribosome involved in the maturation of rRNAs. Required for early cleavages of the pre-RNAs in the 40S ribosomal subunit maturation pathway (By similarity). (301 aa)
SS1G_00260RIX1 domain-containing protein. (721 aa)
SS1G_00317Uncharacterized protein. (954 aa)
SS1G_00535Ribosomal protein; Belongs to the universal ribosomal protein uL1 family. (217 aa)
SS1G_00639Brix domain-containing protein. (414 aa)
SS1G_00678Sas10 domain-containing protein. (624 aa)
nop16Nucleolar protein 16; Involved in the biogenesis of the 60S ribosomal subunit. (226 aa)
SS1G_00825Uncharacterized protein. (918 aa)
SS1G_00972Brix domain-containing protein. (326 aa)
SS1G_00987RNase_PH domain-containing protein. (377 aa)
SS1G_00995Uncharacterized protein. (309 aa)
SS1G_01347Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. (652 aa)
SS1G_01351Ribosomal RNA-processing protein 8; S-adenosyl-L-methionine-dependent methyltransferase that specifically methylates the N(1) position of adenine in helix 25.1 in 25S rRNA. Required both for ribosomal 40S and 60S subunits biogenesis. Required for efficient pre-rRNA cleavage at site A2. Belongs to the methyltransferase superfamily. RRP8 family. (496 aa)
SS1G_01405Uncharacterized protein. (201 aa)
SS1G_01406AB hydrolase-1 domain-containing protein. (337 aa)
SS1G_01408CBF domain-containing protein. (379 aa)
SS1G_01551Uncharacterized protein. (268 aa)
SS1G_01560Uncharacterized protein; Belongs to the RNR ribonuclease family. (998 aa)
SS1G_01564CP-type G domain-containing protein. (530 aa)
SS1G_01708U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (89 aa)
SS1G_01822rRNA-processing protein; Involved in nucleolar integrity and required for processing of the pre-rRNA for the 60S ribosome subunit. Belongs to the CGR1 family. (121 aa)
SS1G_01880Uncharacterized protein. (562 aa)
SS1G_01881Uncharacterized protein. (305 aa)
SS1G_02092SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (713 aa)
SS1G_02099Brix domain-containing protein. (309 aa)
SS1G_02102RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes. (470 aa)
SS1G_02207Uncharacterized protein. (196 aa)
SS1G_02235WD_REPEATS_REGION domain-containing protein. (643 aa)
SS1G_02284Uncharacterized protein. (222 aa)
SS1G_02337BUD22 domain-containing protein. (507 aa)
mak5ATP-dependent RNA helicase mak5; ATP-binding RNA helicase involved in the biogenesis of 60S ribosomal subunits and is required for the normal formation of 25S and 5.8S rRNAs; Belongs to the DEAD box helicase family. DDX24/MAK5 subfamily. (780 aa)
SS1G_02839Uncharacterized protein. (115 aa)
SS1G_02840RNase_PH domain-containing protein. (64 aa)
SS1G_02902WD_REPEATS_REGION domain-containing protein. (542 aa)
SS1G_0298540S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family. (151 aa)
SS1G_03057Uncharacterized protein. (127 aa)
SS1G_03073Uncharacterized protein. (169 aa)
SS1G_03075PINc domain-containing protein. (192 aa)
ytm1Ribosome biogenesis protein ytm1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (478 aa)
SS1G_03089WD_REPEATS_REGION domain-containing protein. (910 aa)
SS1G_03095WD_REPEATS_REGION domain-containing protein. (966 aa)
SS1G_03105Uncharacterized protein. (85 aa)
SS1G_03117Spb1_C domain-containing protein. (393 aa)
SS1G_03118Uncharacterized protein. (347 aa)
SS1G_03122Uncharacterized protein. (1789 aa)
SS1G_03256S1 domain-containing protein. (211 aa)
SS1G_03354Sec2p domain-containing protein. (230 aa)
SS1G_03471J domain-containing protein. (446 aa)
SS1G_03570Uncharacterized protein. (301 aa)
SS1G_03571Uncharacterized protein. (321 aa)
SS1G_03766Uncharacterized protein. (292 aa)
SS1G_03815U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family. (745 aa)
SS1G_03872SpoU_sub_bind domain-containing protein. (600 aa)
SS1G_03893RRM domain-containing protein. (375 aa)
SS1G_03952Uncharacterized protein. (1082 aa)
SS1G_04046Uncharacterized protein. (412 aa)
SS1G_04139Uncharacterized protein. (915 aa)
SS1G_04161Uncharacterized protein. (281 aa)
pxr1Protein pxr1; Involved in rRNA-processing at A0, A1 and A2 sites and regulates negatively telomerase; Belongs to the PINX1 family. (367 aa)
nop7Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (680 aa)
SS1G_04436Uncharacterized protein. (408 aa)
SS1G_04983WD_REPEATS_REGION domain-containing protein. (536 aa)
SS1G_05011Ribosomal_S4 domain-containing protein. (117 aa)
SS1G_05012S4 RNA-binding domain-containing protein. (64 aa)
ipi1Pre-rRNA-processing protein ipi1; Component of the RIX1 complex required for processing of ITS2 sequences from 35S pre-rRNA. (348 aa)
SS1G_05099WD_REPEATS_REGION domain-containing protein. (524 aa)
SS1G_05100Bms1-type G domain-containing protein. (807 aa)
SS1G_05101rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. (383 aa)
SS1G_05265Uncharacterized protein. (885 aa)
SS1G_05306BTB domain-containing protein. (327 aa)
SS1G_05411Uncharacterized protein. (344 aa)
SS1G_05501Ribosomal_L7Ae domain-containing protein. (128 aa)
SS1G_05631WD_REPEATS_REGION domain-containing protein. (579 aa)
SS1G_05668Uncharacterized protein. (309 aa)
LSM5U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. (84 aa)
SS1G_05744WD_REPEATS_REGION domain-containing protein. (442 aa)
SS1G_05854WD_REPEATS_REGION domain-containing protein. (748 aa)
SS1G_05919Uncharacterized protein. (130 aa)
SS1G_06193Uncharacterized protein. (842 aa)
dbp9ATP-dependent RNA helicase dbp9; ATP-binding RNA helicase involved in the biogenesis of 60S ribosomal subunits and is required for the normal formation of 25S and 5.8S rRNAs; Belongs to the DEAD box helicase family. DDX56/DBP9 subfamily. (607 aa)
fal1ATP-dependent RNA helicase fal1; ATP-dependent RNA helicase involved in 40S ribosomal subunit biogenesis. Required for the processing and cleavage of 35S pre-rRNA at sites A0, A1, and A2, leading to mature 18S rRNA (By similarity). Belongs to the DEAD box helicase family. DDX48/FAL1 subfamily. (399 aa)
SS1G_06475Exonuclease domain-containing protein. (190 aa)
SS1G_06488Uncharacterized protein. (255 aa)
SS1G_06566Brix domain-containing protein. (451 aa)
rrp3ATP-dependent rRNA helicase rrp3; ATP-dependent rRNA helicase required for pre-ribosomal RNA processing. Involved in the maturation of the 35S-pre-rRNA and to its cleavage to mature 18S rRNA. (482 aa)
SS1G_06617Uncharacterized protein. (594 aa)
ERB1Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (602 aa)
SS1G_06675Uncharacterized protein. (41 aa)
SS1G_06745Uncharacterized protein. (111 aa)
LSM8U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. (98 aa)
SS1G_0683560S ribosomal protein L35. (127 aa)
SS1G_07202Uncharacterized protein. (1805 aa)
efg1rRNA-processing protein efg1; Involved in rRNA processing; Belongs to the EFG1 family. (305 aa)
SS1G_07363SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (627 aa)
SS1G_07406Kri1_C domain-containing protein. (656 aa)
SS1G_07469DUF2431 domain-containing protein. (344 aa)
SS1G_07544Helicase C-terminal domain-containing protein. (495 aa)
SS1G_07557Uncharacterized protein. (395 aa)
SS1G_076765'-3' exoribonuclease 1; Multifunctional protein that exhibits several independent functions at different levels of the cellular processes. 5'-3' exonuclease component of the nonsense-mediated mRNA decay (NMD) which is a highly conserved mRNA degradation pathway, an RNA surveillance system whose role is to identify and rid cells of mRNA with premature termination codons and thus prevents accumulation of potentially harmful truncated proteins. (1390 aa)
SS1G_07700Uncharacterized protein. (379 aa)
SS1G_07712WD_REPEATS_REGION domain-containing protein. (851 aa)
SS1G_07742Brix domain-containing protein. (324 aa)
SS1G_07800F-box domain-containing protein. (369 aa)
SS1G_07872Ribosome biogenesis protein Nop10. (66 aa)
SS1G_12042RNase_PH domain-containing protein. (261 aa)
SS1G_1207740S ribosomal protein S21; Required for the processing of the 20S rRNA-precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Has a physiological role leading to 18S rRNA stability. (88 aa)
NAT10RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. (1074 aa)
NOP58Nucleolar protein 58; Required for pre-18S rRNA processing. May bind microtubules (By similarity); Belongs to the NOP5/NOP56 family. (570 aa)
spb4ATP-dependent rRNA helicase spb4; ATP-binding RNA helicase involved in the biogenesis of 60S ribosomal subunits. Binds 90S pre-ribosomal particles and dissociates from pre-60S ribosomal particles after processing of 27SB pre-rRNA. Required for the normal formation of 18S rRNA through the processing of pre-rRNAs at sites A0, A1 and A2, and the normal formation of 25S and 5.8S rRNAs through the processing of pre-rRNAs at sites C1 and C2. (625 aa)
SS1G_12242Uncharacterized protein. (182 aa)
SS1G_12340Uncharacterized protein. (721 aa)
SS1G_11736Uncharacterized protein. (587 aa)
TSR3Ribosome biogenesis protein TSR3; Ribosome biogenesis protein required for processing 35S pre- rRNA at site D; Belongs to the TSR3 family. (401 aa)
SS1G_11809HAD_SAK_1 domain-containing protein. (575 aa)
SS1G_11814CLP1_P domain-containing protein. (741 aa)
SS1G_11824Nop domain-containing protein. (516 aa)
SS1G_11873Uncharacterized protein. (329 aa)
SS1G_11882HRDC domain-containing protein. (808 aa)
SS1G_12458Uncharacterized protein. (279 aa)
SS1G_1247740S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (201 aa)
SS1G_12483Uncharacterized protein. (323 aa)
drs1ATP-dependent RNA helicase drs1; ATP-binding RNA helicase involved in ribosome assembly. (801 aa)
SS1G_12551BP28CT domain-containing protein. (1802 aa)
SS1G_12767Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (202 aa)
lsm6U6 snRNA-associated Sm-like protein LSm6; Component of LSm protein complexes, which are involved in RNA processing and may function in a chaperone-like manner, facilitating the efficient association of RNA processing factors with their substrates. Component of the cytoplasmic LSM1-LSM7 complex, which is thought to be involved in mRNA degradation by activating the decapping step in the 5'-to-3' mRNA decay pathway. Component of the nuclear LSM2- LSM8 complex, which is involved in splicing of nuclear mRNAs. LSM2-LSM8 associates with multiple snRNP complexes containing the U6 snRNA (U4/U6 [...] (85 aa)
SS1G_12994WD_REPEATS_REGION domain-containing protein. (897 aa)
SS1G_13164Uncharacterized protein. (243 aa)
LSM4U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (122 aa)
SS1G_13258Uncharacterized protein. (1531 aa)
SS1G_13259Uncharacterized protein. (651 aa)
SS1G_13336Uncharacterized protein. (250 aa)
SS1G_135425'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II. (931 aa)
SS1G_13558Uncharacterized protein. (209 aa)
SS1G_13585Uncharacterized protein. (230 aa)
SS1G_13815Uncharacterized protein. (219 aa)
SS1G_13816Uncharacterized protein. (102 aa)
SS1G_13858Exonuclease domain-containing protein. (332 aa)
SS1G_13924Uncharacterized protein. (494 aa)
dbp7ATP-dependent RNA helicase dbp7; ATP-binding RNA helicase involved in the biogenesis of 60S ribosomal subunits and is required for the normal formation of 25S and 5.8S rRNAs; Belongs to the DEAD box helicase family. DDX31/DBP7 subfamily. (877 aa)
SS1G_14068NUC153 domain-containing protein. (204 aa)
SS1G_14069Uncharacterized protein. (132 aa)
SS1G_14112RRM domain-containing protein. (323 aa)
SS1G_14124Sm domain-containing protein. (138 aa)
SS1G_14217Uncharacterized protein. (371 aa)
SS1G_14329Utp12 domain-containing protein. (399 aa)
SS1G_14344NUC173 domain-containing protein. (1263 aa)
Your Current Organism:
Sclerotinia sclerotiorum
NCBI taxonomy Id: 665079
Other names: S. sclerotiorum 1980 UF-70, Sclerotinia sclerotiorum 1980 UF-70
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