(13 nodes) Carboxy-terminal domain protein kinase complex network (Sclerotinia sclerotiorum)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SS1G_07672	Protein kinase domain-containing protein. (1071 aa)
	SS1G_07704	Uncharacterized protein. (847 aa)
	SS1G_09606	Helicase ATP-binding domain-containing protein. (616 aa)
	SS1G_13425	Uncharacterized protein. (356 aa)
	SS1G_07615	General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family. (479 aa)
	SS1G_00199	Protein kinase domain-containing protein. (581 aa)
	SS1G_04596	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (420 aa)
	SS1G_04717	RING-type domain-containing protein. (362 aa)
	SS1G_05935	Uncharacterized protein. (643 aa)
	SS1G_06051	Serine/threonine-protein kinase; Belongs to the protein kinase superfamily. (400 aa)
	SS1G_07559	CYCLIN domain-containing protein; Belongs to the cyclin family. (427 aa)
	SS1G_07606	Uncharacterized protein. (569 aa)
	SS1G_07292	CYCLIN domain-containing protein; Belongs to the cyclin family. (383 aa)

Your Current Organism:

Sclerotinia sclerotiorum

NCBI taxonomy Id: 665079
Other names: S. sclerotiorum 1980 UF-70, Sclerotinia sclerotiorum 1980 UF-70

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SS1G_00199	SS1G_04596	A7E4H7	A7EH04	Protein kinase domain-containing protein.	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.	0.806
SS1G_00199	SS1G_04717	A7E4H7	A7EHC5	Protein kinase domain-containing protein.	RING-type domain-containing protein.	0.817
SS1G_00199	SS1G_05935	A7E4H7	A7EKT8	Protein kinase domain-containing protein.	Uncharacterized protein.	0.809
SS1G_00199	SS1G_06051	A7E4H7	A7EL54	Protein kinase domain-containing protein.	Serine/threonine-protein kinase; Belongs to the protein kinase superfamily.	0.881
SS1G_00199	SS1G_07292	A7E4H7	A7EPP3	Protein kinase domain-containing protein.	CYCLIN domain-containing protein; Belongs to the cyclin family.	0.882
SS1G_00199	SS1G_07559	A7E4H7	A7EQF7	Protein kinase domain-containing protein.	CYCLIN domain-containing protein; Belongs to the cyclin family.	0.970
SS1G_00199	SS1G_07606	A7E4H7	A7EQK4	Protein kinase domain-containing protein.	Uncharacterized protein.	0.777
SS1G_00199	SS1G_07615	A7E4H7	A7EQL3	Protein kinase domain-containing protein.	General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family.	0.809
SS1G_00199	SS1G_07672	A7E4H7	A7EQR9	Protein kinase domain-containing protein.	Protein kinase domain-containing protein.	0.748
SS1G_00199	SS1G_07704	A7E4H7	A7EQV1	Protein kinase domain-containing protein.	Uncharacterized protein.	0.814
SS1G_00199	SS1G_09606	A7E4H7	A7EW97	Protein kinase domain-containing protein.	Helicase ATP-binding domain-containing protein.	0.733
SS1G_00199	SS1G_13425	A7E4H7	A7F745	Protein kinase domain-containing protein.	Uncharacterized protein.	0.809
SS1G_04596	SS1G_00199	A7EH04	A7E4H7	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.	Protein kinase domain-containing protein.	0.806
SS1G_04596	SS1G_04717	A7EH04	A7EHC5	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.	RING-type domain-containing protein.	0.999
SS1G_04596	SS1G_05935	A7EH04	A7EKT8	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.	Uncharacterized protein.	0.999
SS1G_04596	SS1G_06051	A7EH04	A7EL54	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.	Serine/threonine-protein kinase; Belongs to the protein kinase superfamily.	0.986
SS1G_04596	SS1G_07292	A7EH04	A7EPP3	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.	CYCLIN domain-containing protein; Belongs to the cyclin family.	0.993
SS1G_04596	SS1G_07559	A7EH04	A7EQF7	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.	CYCLIN domain-containing protein; Belongs to the cyclin family.	0.787
SS1G_04596	SS1G_07615	A7EH04	A7EQL3	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.	General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family.	0.999
SS1G_04596	SS1G_07672	A7EH04	A7EQR9	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.	Protein kinase domain-containing protein.	0.806