STRINGSTRING
SS1G_11839 SS1G_11839 SS1G_14283 SS1G_14283 SS1G_13564 SS1G_13564 drs1 drs1 SS1G_12501 SS1G_12501 spb4 spb4 rps0 rps0 SS1G_11460 SS1G_11460 SS1G_11436 SS1G_11436 SS1G_11034 SS1G_11034 SS1G_10315 SS1G_10315 SS1G_09681 SS1G_09681 SS1G_09678 SS1G_09678 SS1G_09568 SS1G_09568 SS1G_09423 SS1G_09423 SS1G_08822 SS1G_08822 SS1G_08391 SS1G_08391 SS1G_07800 SS1G_07800 SS1G_07742 SS1G_07742 SS1G_07712 SS1G_07712 TIF6 TIF6 SS1G_06566 SS1G_06566 SS1G_06488 SS1G_06488 SS1G_06193 SS1G_06193 SS1G_05502 SS1G_05502 SS1G_04977 SS1G_04977 SS1G_04380 SS1G_04380 SS1G_03365 SS1G_03365 SS1G_03141 SS1G_03141 SS1G_03122 SS1G_03122 SS1G_02099 SS1G_02099 SS1G_01698 SS1G_01698 SS1G_01154 SS1G_01154 SS1G_00995 SS1G_00995 SS1G_00846 SS1G_00846 SS1G_00502 SS1G_00502 SS1G_00358 SS1G_00358 SS1G_00090 SS1G_00090 SS1G_00023 SS1G_00023
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SS1G_11839Uncharacterized protein. (288 aa)
SS1G_1428360S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10. (312 aa)
SS1G_13564W2 domain-containing protein. (427 aa)
drs1ATP-dependent RNA helicase drs1; ATP-binding RNA helicase involved in ribosome assembly. (801 aa)
SS1G_12501Uncharacterized protein. (245 aa)
spb4ATP-dependent rRNA helicase spb4; ATP-binding RNA helicase involved in the biogenesis of 60S ribosomal subunits. Binds 90S pre-ribosomal particles and dissociates from pre-60S ribosomal particles after processing of 27SB pre-rRNA. Required for the normal formation of 18S rRNA through the processing of pre-rRNAs at sites A0, A1 and A2, and the normal formation of 25S and 5.8S rRNAs through the processing of pre-rRNAs at sites C1 and C2. (625 aa)
rps040S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. (297 aa)
SS1G_11460Uncharacterized protein. (517 aa)
SS1G_11436Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (237 aa)
SS1G_11034Rsa3 domain-containing protein. (188 aa)
SS1G_1031560S ribosomal protein L5. (296 aa)
SS1G_0968160S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (188 aa)
SS1G_09678Midasin; Nuclear chaperone required for maturation and nuclear export of pre-60S ribosome subunits; Belongs to the midasin family. (4951 aa)
SS1G_09568Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family. (135 aa)
SS1G_0942340S ribosomal protein S27. (82 aa)
SS1G_08822CP-type G domain-containing protein. (661 aa)
SS1G_08391Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. (437 aa)
SS1G_07800F-box domain-containing protein. (369 aa)
SS1G_07742Brix domain-containing protein. (324 aa)
SS1G_07712WD_REPEATS_REGION domain-containing protein. (851 aa)
TIF6Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. Is also involved in ribosome biogenesis. Associates with pre-60S subunits in the nucleus and is involved in its nuclear export; Belongs to the eIF-6 family. (246 aa)
SS1G_06566Brix domain-containing protein. (451 aa)
SS1G_06488Uncharacterized protein. (255 aa)
SS1G_06193Uncharacterized protein. (842 aa)
SS1G_0550260S ribosomal protein L10-A. (221 aa)
SS1G_04977Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family. (328 aa)
SS1G_04380WD_REPEATS_REGION domain-containing protein. (508 aa)
SS1G_03365Tr-type G domain-containing protein. (1070 aa)
SS1G_03141Uncharacterized protein. (188 aa)
SS1G_03122Uncharacterized protein. (1789 aa)
SS1G_02099Brix domain-containing protein. (309 aa)
SS1G_0169840S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family. (153 aa)
SS1G_0115460S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family. (200 aa)
SS1G_00995Uncharacterized protein. (309 aa)
SS1G_0084640S ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family. (213 aa)
SS1G_0050240S ribosomal protein S19. (149 aa)
SS1G_00358Ribosomal_S7 domain-containing protein. (412 aa)
SS1G_0009040S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family. (150 aa)
SS1G_0002360S ribosomal protein L25. (154 aa)
Your Current Organism:
Sclerotinia sclerotiorum
NCBI taxonomy Id: 665079
Other names: S. sclerotiorum 1980 UF-70, Sclerotinia sclerotiorum 1980 UF-70
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