STRINGSTRING
SS1G_13927 SS1G_13927 SS1G_01136 SS1G_01136 SS1G_01182 SS1G_01182 SS1G_01416 SS1G_01416 SS1G_03660 SS1G_03660 SS1G_04056 SS1G_04056 SS1G_04057 SS1G_04057 SS1G_06128 SS1G_06128 SS1G_08504 SS1G_08504 SS1G_09569 SS1G_09569 SS1G_09612 SS1G_09612 SS1G_10429 SS1G_10429 SS1G_10772 SS1G_10772 SS1G_11264 SS1G_11264 SS1G_11338 SS1G_11338 SS1G_12247 SS1G_12247 SS1G_12270 SS1G_12270 SS1G_11915 SS1G_11915
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SS1G_13927TAFII55_N domain-containing protein. (533 aa)
SS1G_01136TFIIB-type domain-containing protein. (350 aa)
SS1G_01182PHD domain-containing protein. (811 aa)
SS1G_01416Uncharacterized protein. (363 aa)
SS1G_03660Uncharacterized protein. (356 aa)
SS1G_04056Fungal_trans domain-containing protein. (337 aa)
SS1G_04057Uncharacterized protein. (326 aa)
SS1G_06128DUF3591 domain-containing protein. (1089 aa)
SS1G_08504Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (97 aa)
SS1G_09569Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...] (192 aa)
SS1G_09612TAF domain-containing protein. (469 aa)
SS1G_10429Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (686 aa)
SS1G_10772Uncharacterized protein. (141 aa)
SS1G_11264TFIID_20kDa domain-containing protein. (705 aa)
SS1G_11338CBFD_NFYB_HMF domain-containing protein. (618 aa)
SS1G_12247Transcription elongation factor s-ii. (301 aa)
SS1G_12270Uncharacterized protein. (264 aa)
SS1G_11915Acyl_transf_3 domain-containing protein. (448 aa)
Your Current Organism:
Sclerotinia sclerotiorum
NCBI taxonomy Id: 665079
Other names: S. sclerotiorum 1980 UF-70, Sclerotinia sclerotiorum 1980 UF-70
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