STRINGSTRING
ALA1 ALA1 SS1G_13534 SS1G_13534 SS1G_11248 SS1G_11248 SS1G_11155 SS1G_11155 SS1G_06311 SS1G_06311 SS1G_05805 SS1G_05805 SS1G_04715 SS1G_04715 SS1G_00638 SS1G_00638 SS1G_00187 SS1G_00187
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ALA1Alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain. Belongs to the class-II aminoacyl-tRNA synthetase family. (936 aa)
SS1G_13534Sfi1 domain-containing protein. (1106 aa)
SS1G_11248AA_TRNA_LIGASE_II domain-containing protein. (506 aa)
SS1G_11155tRNA-synt_2 domain-containing protein. (279 aa)
SS1G_06311AA_TRNA_LIGASE_II domain-containing protein. (459 aa)
SS1G_05805AA_TRNA_LIGASE_II domain-containing protein. (536 aa)
SS1G_04715tRNA-synt_2 domain-containing protein. (530 aa)
SS1G_00638AA_TRNA_LIGASE_II domain-containing protein. (665 aa)
SS1G_00187Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (360 aa)
Your Current Organism:
Sclerotinia sclerotiorum
NCBI taxonomy Id: 665079
Other names: S. sclerotiorum 1980 UF-70, Sclerotinia sclerotiorum 1980 UF-70
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