(90 nodes) Armadillo-like helical network (Sclerotinia sclerotiorum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SS1G_01326	Uncharacterized protein. (1085 aa)
	SS1G_01553	Coatomer subunit beta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. (958 aa)
	SS1G_01691	DUF3453 domain-containing protein. (618 aa)
	SS1G_01707	Uncharacterized protein. (308 aa)
	SS1G_01727	Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (3857 aa)
	SS1G_01761	PUM-HD domain-containing protein. (810 aa)
	SS1G_02224	HECT domain-containing protein. (1840 aa)
	SS1G_02351	Importin N-terminal domain-containing protein. (1094 aa)
	SS1G_02555	Coatomer subunit gamma; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. (901 aa)
	SS1G_03004	TFCD_C domain-containing protein. (1132 aa)
	SS1G_03093	Uncharacterized protein. (1917 aa)
	SS1G_03236	Uncharacterized protein. (559 aa)
	SS1G_03713	Protein kinase domain-containing protein. (1379 aa)
	SS1G_03731	Uncharacterized protein. (2597 aa)
	SS1G_03746	Uncharacterized protein. (1032 aa)
	SS1G_03751	PUM-HD domain-containing protein. (1085 aa)
	SS1G_04205	Uncharacterized protein. (354 aa)
	SS1G_04536	26S proteasome regulatory subunit RPN2; Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins. (1130 aa)
	SS1G_04747	Uncharacterized protein. (730 aa)
	SS1G_04907	Elongation factor 3. (1110 aa)
	SS1G_05682	Importin N-terminal domain-containing protein. (1062 aa)
	SS1G_05874	Uncharacterized protein. (882 aa)
	SS1G_06066	AP-2 complex subunit alpha; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration. (911 aa)
	SS1G_06758	V-type proton ATPase subunit H; Subunit of the peripheral V1 complex of vacuolar ATPase. Subunit H activates ATPase activity of the enzyme and couples ATPase activity to proton flow. Vacuolar ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells, thus providing most of the energy required for transport processes in the vacuolar system. (473 aa)
	SS1G_06776	PUM-HD domain-containing protein. (716 aa)
	SS1G_06884	Protein kinase domain-containing protein. (977 aa)
	SS1G_07008	Uncharacterized protein. (623 aa)
	SS1G_00052	TIP120 domain-containing protein. (1355 aa)
	SS1G_00079	PUM-HD domain-containing protein. (964 aa)
	SS1G_00107	Uncharacterized protein. (1145 aa)
	SS1G_00115	Uncharacterized protein. (565 aa)
	SS1G_00189	WAPL domain-containing protein. (828 aa)
	SS1G_00309	Uncharacterized protein. (1002 aa)
	SS1G_00477	Uncharacterized protein. (772 aa)
	SS1G_00479	Drf_GBD domain-containing protein. (883 aa)
	SS1G_00569	Importin N-terminal domain-containing protein. (962 aa)
	SS1G_00947	DUF1716 domain-containing protein. (597 aa)
	SS1G_07119	Protein phosphatase PP2A regulatory subunit A. (616 aa)
	SS1G_07202	Uncharacterized protein. (1805 aa)
	los1	Exportin-T; tRNA nucleus export receptor which facilitates tRNA translocation across the nuclear pore complex. Involved in pre-tRNA splicing, probably by affecting the interaction of pre-tRNA with splicing endonuclease (By similarity); Belongs to the exportin family. (1023 aa)
	SS1G_07372	AP-1 complex subunit gamma. (860 aa)
	SS1G_07693	Cnd3 domain-containing protein. (1093 aa)
	SS1G_07750	Uncharacterized protein. (976 aa)
	SS1G_07753	ELMO domain-containing protein. (731 aa)
	SS1G_07868	Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit; The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment. (721 aa)
	SS1G_08292	Uncharacterized protein. (451 aa)
	SS1G_08319	Uncharacterized protein. (667 aa)
	SS1G_08334	Sister chromatid cohesion protein. (1881 aa)
	LIA1	Deoxyhypusine hydroxylase; Catalyzes the hydroxylation of the N(6)-(4-aminobutyl)-L- lysine intermediate to form hypusine, an essential post-translational modification only found in mature eIF-5A factor. (338 aa)
	SS1G_08464	AP complex subunit beta; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration. (726 aa)
	SS1G_08515	Adaptin_N domain-containing protein. (827 aa)
	SS1G_08574	Uncharacterized protein. (1566 aa)
	SS1G_08607	26S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins. (907 aa)
	SS1G_08734	Fes1 domain-containing protein. (215 aa)
	SS1G_08957	Uncharacterized protein. (1264 aa)
	SS1G_08985	Uncharacterized protein. (1723 aa)
	SS1G_09434	WD_REPEATS_REGION domain-containing protein. (1416 aa)
	SS1G_09963	Importin N-terminal domain-containing protein. (970 aa)
	SS1G_10171	CRM1_C domain-containing protein. (930 aa)
	SS1G_10721	Uncharacterized protein. (660 aa)
	SS1G_10787	IFRD domain-containing protein. (442 aa)
	SS1G_11012	Uncharacterized protein. (815 aa)
	SS1G_11137	Condensin complex subunit 1; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases. (1230 aa)
	SS1G_11256	AP-3 complex subunit delta; Part of the AP-3 complex, an adaptor-related complex which is not clathrin-associated. The complex is associated with the Golgi region as well as more peripheral structures. It facilitates the budding of vesicles from the Golgi membrane. (859 aa)
	SS1G_11425	Importin N-terminal domain-containing protein. (1047 aa)
	SS1G_11465	SCD domain-containing protein. (1163 aa)
	SS1G_11472	Importin subunit alpha; Belongs to the importin alpha family. (550 aa)
	SS1G_11736	Uncharacterized protein. (587 aa)
	SS1G_11848	AP complex subunit beta; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration. (727 aa)
	SS1G_11860	Xpo1 domain-containing protein. (1149 aa)
	SS1G_11926	Uncharacterized protein. (1934 aa)
	SS1G_11951	TOG domain-containing protein. (1097 aa)
	SS1G_12551	BP28CT domain-containing protein. (1802 aa)
	SS1G_12740	Uncharacterized protein. (306 aa)
	SS1G_12920	Uncharacterized protein. (1848 aa)
	SS1G_12947	Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family. (2430 aa)
	SS1G_13258	Uncharacterized protein. (1531 aa)
	SS1G_13259	Uncharacterized protein. (651 aa)
	SS1G_13388	Uncharacterized protein. (914 aa)
	SS1G_13426	UNC45-central domain-containing protein. (717 aa)
	SS1G_13520	Uncharacterized protein. (366 aa)
	SS1G_13543	Uncharacterized protein. (966 aa)
	SS1G_13565	Uncharacterized protein. (1015 aa)
	SS1G_13666	Uncharacterized protein. (1158 aa)
	SS1G_13681	Uncharacterized protein. (1717 aa)
	SS1G_13786	Importin N-terminal domain-containing protein. (1032 aa)
	SS1G_13833	Uncharacterized protein. (1067 aa)
	SS1G_14204	Importin N-terminal domain-containing protein. (871 aa)
	SS1G_14344	NUC173 domain-containing protein. (1263 aa)
	SS1G_14385	CBF domain-containing protein. (1085 aa)

Your Current Organism:

Sclerotinia sclerotiorum

NCBI taxonomy Id: 665079
Other names: S. sclerotiorum 1980 UF-70, Sclerotinia sclerotiorum 1980 UF-70

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LIA1	SS1G_04907	A7ESN0	A7EHW5	Deoxyhypusine hydroxylase; Catalyzes the hydroxylation of the N(6)-(4-aminobutyl)-L- lysine intermediate to form hypusine, an essential post-translational modification only found in mature eIF-5A factor.	Elongation factor 3.	0.783
LIA1	SS1G_13833	A7ESN0	A7F8A2	Deoxyhypusine hydroxylase; Catalyzes the hydroxylation of the N(6)-(4-aminobutyl)-L- lysine intermediate to form hypusine, an essential post-translational modification only found in mature eIF-5A factor.	Uncharacterized protein.	0.727
SS1G_00079	SS1G_02224	A7E457	A7EA92	PUM-HD domain-containing protein.	HECT domain-containing protein.	0.401
SS1G_00079	SS1G_06776	A7E457	A7EN77	PUM-HD domain-containing protein.	PUM-HD domain-containing protein.	0.594
SS1G_00107	SS1G_09434	A7E485	A7EVS5	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.841
SS1G_00107	SS1G_12947	A7E485	A7F5R9	Uncharacterized protein.	Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.	0.980
SS1G_00107	SS1G_13565	A7E485	A7F7I5	Uncharacterized protein.	Uncharacterized protein.	0.625
SS1G_00189	SS1G_01727	A7E4G7	A7E8U9	WAPL domain-containing protein.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.451
SS1G_00189	SS1G_06758	A7E4G7	A7EN59	WAPL domain-containing protein.	V-type proton ATPase subunit H; Subunit of the peripheral V1 complex of vacuolar ATPase. Subunit H activates ATPase activity of the enzyme and couples ATPase activity to proton flow. Vacuolar ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells, thus providing most of the energy required for transport processes in the vacuolar system.	0.686
SS1G_00189	SS1G_09434	A7E4G7	A7EVS5	WAPL domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.940
SS1G_00189	SS1G_12947	A7E4G7	A7F5R9	WAPL domain-containing protein.	Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.	0.980
SS1G_00309	SS1G_00569	A7E4T7	A7E5J4	Uncharacterized protein.	Importin N-terminal domain-containing protein.	0.473
SS1G_00309	SS1G_02351	A7E4T7	A7EAL9	Uncharacterized protein.	Importin N-terminal domain-containing protein.	0.623
SS1G_00309	SS1G_05682	A7E4T7	A7EK36	Uncharacterized protein.	Importin N-terminal domain-containing protein.	0.579
SS1G_00309	SS1G_07008	A7E4T7	A7ENV9	Uncharacterized protein.	Uncharacterized protein.	0.548
SS1G_00309	SS1G_09963	A7E4T7	A7EXA2	Uncharacterized protein.	Importin N-terminal domain-containing protein.	0.501
SS1G_00309	SS1G_11425	A7E4T7	A7F1F5	Uncharacterized protein.	Importin N-terminal domain-containing protein.	0.579
SS1G_00309	SS1G_11860	A7E4T7	A7F3L4	Uncharacterized protein.	Xpo1 domain-containing protein.	0.587
SS1G_00309	SS1G_11951	A7E4T7	A7F3V5	Uncharacterized protein.	TOG domain-containing protein.	0.600
SS1G_00309	SS1G_13786	A7E4T7	A7F856	Uncharacterized protein.	Importin N-terminal domain-containing protein.	0.590