(15 nodes) BRCT domain superfamily network (Sclerotinia sclerotiorum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SS1G_04531	BRCT domain-containing protein. (1294 aa)
	SS1G_05603	Uncharacterized protein. (396 aa)
	SS1G_06612	BRCT domain-containing protein. (845 aa)
	SS1G_07980	RNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II. (806 aa)
	SS1G_14422	Uncharacterized protein. (850 aa)
	SS1G_12346	BRCT domain-containing protein. (472 aa)
	SS1G_11392	Uncharacterized protein. (792 aa)
	SS1G_08150	BRCT domain-containing protein. (281 aa)
	nop7	Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (680 aa)
	SS1G_03342	Uncharacterized protein. (805 aa)
	SS1G_02301	ARID domain-containing protein. (829 aa)
	SS1G_02275	DBF4-type domain-containing protein. (662 aa)
	SS1G_01751	BRCT domain-containing protein. (1262 aa)
	SS1G_01299	DNA repair protein REV1; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template- dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents; Belongs to the DNA polymerase type-Y family. (1255 aa)
	SS1G_00911	Replication factor C subunit 1. (1047 aa)

Your Current Organism:

Sclerotinia sclerotiorum

NCBI taxonomy Id: 665079
Other names: S. sclerotiorum 1980 UF-70, Sclerotinia sclerotiorum 1980 UF-70

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SS1G_00911	SS1G_01299	A7E6I6	A7E7M1	Replication factor C subunit 1.	DNA repair protein REV1; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template- dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents; Belongs to the DNA polymerase type-Y family.	0.627
SS1G_00911	SS1G_03342	A7E6I6	A7EDF2	Replication factor C subunit 1.	Uncharacterized protein.	0.498
SS1G_00911	SS1G_04531	A7E6I6	A7EGT9	Replication factor C subunit 1.	BRCT domain-containing protein.	0.491
SS1G_00911	SS1G_11392	A7E6I6	A7F1C2	Replication factor C subunit 1.	Uncharacterized protein.	0.488
SS1G_01299	SS1G_00911	A7E7M1	A7E6I6	DNA repair protein REV1; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template- dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents; Belongs to the DNA polymerase type-Y family.	Replication factor C subunit 1.	0.627
SS1G_01299	SS1G_03342	A7E7M1	A7EDF2	DNA repair protein REV1; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template- dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents; Belongs to the DNA polymerase type-Y family.	Uncharacterized protein.	0.409
SS1G_01299	SS1G_06612	A7E7M1	A7EMR3	DNA repair protein REV1; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template- dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents; Belongs to the DNA polymerase type-Y family.	BRCT domain-containing protein.	0.420
SS1G_01751	SS1G_03342	A7E8X3	A7EDF2	BRCT domain-containing protein.	Uncharacterized protein.	0.612
SS1G_01751	SS1G_04531	A7E8X3	A7EGT9	BRCT domain-containing protein.	BRCT domain-containing protein.	0.804
SS1G_01751	SS1G_11392	A7E8X3	A7F1C2	BRCT domain-containing protein.	Uncharacterized protein.	0.993
SS1G_01751	SS1G_14422	A7E8X3	A7F9Z1	BRCT domain-containing protein.	Uncharacterized protein.	0.780
SS1G_02275	SS1G_11392	A7EAE3	A7F1C2	DBF4-type domain-containing protein.	Uncharacterized protein.	0.605
SS1G_03342	SS1G_00911	A7EDF2	A7E6I6	Uncharacterized protein.	Replication factor C subunit 1.	0.498
SS1G_03342	SS1G_01299	A7EDF2	A7E7M1	Uncharacterized protein.	DNA repair protein REV1; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template- dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents; Belongs to the DNA polymerase type-Y family.	0.409
SS1G_03342	SS1G_01751	A7EDF2	A7E8X3	Uncharacterized protein.	BRCT domain-containing protein.	0.612
SS1G_03342	SS1G_06612	A7EDF2	A7EMR3	Uncharacterized protein.	BRCT domain-containing protein.	0.837
SS1G_04531	SS1G_00911	A7EGT9	A7E6I6	BRCT domain-containing protein.	Replication factor C subunit 1.	0.491
SS1G_04531	SS1G_01751	A7EGT9	A7E8X3	BRCT domain-containing protein.	BRCT domain-containing protein.	0.804
SS1G_04531	SS1G_11392	A7EGT9	A7F1C2	BRCT domain-containing protein.	Uncharacterized protein.	0.883
SS1G_04531	SS1G_14422	A7EGT9	A7F9Z1	BRCT domain-containing protein.	Uncharacterized protein.	0.486