28 items (Sclerotinia sclerotiorum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SS1G_07564	Uncharacterized protein. (332 aa)
	SS1G_07525	Elongator complex protein 3; Catalytic tRNA acetyltransferase subunit of the RNA polymerase II elongator complex, which is a component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation. (581 aa)
	SS1G_07133	Uncharacterized protein. (1196 aa)
	SS1G_09407	BZIP domain-containing protein. (730 aa)
	SS1G_09609	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
	SS1G_09629	Histone acetyltransferase type B catalytic subunit; Catalytic component of the histone acetylase B (HAT-B) complex. Has intrinsic substrate specificity that modifies lysine in recognition sequence GXGKXG. Involved in DNA double-strand break repair; Belongs to the HAT1 family. (502 aa)
	SS1G_10960	Histone H2B; Belongs to the histone H2B family. (139 aa)
	SS1G_11338	CBFD_NFYB_HMF domain-containing protein. (618 aa)
	SS1G_13353	Uncharacterized protein. (287 aa)
	SS1G_13663	YL1_C domain-containing protein. (723 aa)
	SS1G_14286	Uncharacterized protein. (1740 aa)
	SS1G_14339	MRG domain-containing protein. (480 aa)
	SS1G_14340	Uncharacterized protein. (216 aa)
	SS1G_14341	Uncharacterized protein. (52 aa)
	SS1G_06144	Uncharacterized protein. (230 aa)
	SS1G_06103	Chromatin modification-related protein. (705 aa)
	SS1G_04980	Uncharacterized protein. (441 aa)
	SS1G_04913	BZIP domain-containing protein. (573 aa)
	SS1G_03865	Uncharacterized protein. (1016 aa)
	SS1G_03820	SANT_DAMP1_like domain-containing protein. (621 aa)
	SS1G_03803	Uncharacterized protein. (372 aa)
	SS1G_02102	RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes. (470 aa)
	SS1G_01064	SGF29 C-terminal domain-containing protein. (322 aa)
	SS1G_00497	Uncharacterized protein. (131 aa)
	SS1G_08474	Uncharacterized protein. (402 aa)
	SS1G_08731	Uncharacterized protein. (353 aa)
	SS1G_08497	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (138 aa)
	SS1G_07726	Uncharacterized protein. (460 aa)

Your Current Organism:

Sclerotinia sclerotiorum

NCBI taxonomy Id: 665079
Other names: S. sclerotiorum 1980 UF-70, Sclerotinia sclerotiorum 1980 UF-70

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SS1G_00497	SS1G_01064	A7E5C2	A7E6Y8	Uncharacterized protein.	SGF29 C-terminal domain-containing protein.	0.992
SS1G_00497	SS1G_07564	A7E5C2	A7EQG2	Uncharacterized protein.	Uncharacterized protein.	0.984
SS1G_01064	SS1G_00497	A7E6Y8	A7E5C2	SGF29 C-terminal domain-containing protein.	Uncharacterized protein.	0.992
SS1G_01064	SS1G_07564	A7E6Y8	A7EQG2	SGF29 C-terminal domain-containing protein.	Uncharacterized protein.	0.997
SS1G_01064	SS1G_11338	A7E6Y8	A7F168	SGF29 C-terminal domain-containing protein.	CBFD_NFYB_HMF domain-containing protein.	0.820
SS1G_02102	SS1G_03820	A7E9X2	A7EET0	RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.	SANT_DAMP1_like domain-containing protein.	0.984
SS1G_02102	SS1G_08497	A7E9X2	A7ET42	RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.	0.750
SS1G_02102	SS1G_09609	A7E9X2	A7EWA0	RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.	0.750
SS1G_02102	SS1G_10960	A7E9X2	A7F043	RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.	Histone H2B; Belongs to the histone H2B family.	0.920
SS1G_02102	SS1G_13353	A7E9X2	A7F6X3	RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.	Uncharacterized protein.	0.921
SS1G_02102	SS1G_13663	A7E9X2	A7F7T3	RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.	YL1_C domain-containing protein.	0.964
SS1G_02102	SS1G_14339	A7E9X2	A7F9Q8	RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.	MRG domain-containing protein.	0.826
SS1G_02102	SS1G_14340	A7E9X2	A7F9Q9	RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.	Uncharacterized protein.	0.638
SS1G_02102	SS1G_14341	A7E9X2	A7F9R0	RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.	Uncharacterized protein.	0.638
SS1G_03803	SS1G_03865	A7EER3	A7EEX4	Uncharacterized protein.	Uncharacterized protein.	0.783
SS1G_03803	SS1G_07525	A7EER3	A7EQC4	Uncharacterized protein.	Elongator complex protein 3; Catalytic tRNA acetyltransferase subunit of the RNA polymerase II elongator complex, which is a component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation.	0.782
SS1G_03803	SS1G_08474	A7EER3	A7ET19	Uncharacterized protein.	Uncharacterized protein.	0.823
SS1G_03820	SS1G_02102	A7EET0	A7E9X2	SANT_DAMP1_like domain-containing protein.	RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.	0.984
SS1G_03820	SS1G_08497	A7EET0	A7ET42	SANT_DAMP1_like domain-containing protein.	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.	0.538
SS1G_03820	SS1G_09609	A7EET0	A7EWA0	SANT_DAMP1_like domain-containing protein.	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.	0.538