STRINGSTRING
SS1G_00169 SS1G_00169 SS1G_00428 SS1G_00428 SS1G_02923 SS1G_02923 SS1G_03958 SS1G_03958 SS1G_06018 SS1G_06018 SS1G_06080 SS1G_06080 SS1G_06081 SS1G_06081 SS1G_06094 SS1G_06094 SS1G_06102 SS1G_06102 SS1G_07659 SS1G_07659 SS1G_07921 SS1G_07921 SS1G_08637 SS1G_08637 SS1G_10113 SS1G_10113 SS1G_10644 SS1G_10644 SS1G_11088 SS1G_11088 SS1G_12152 SS1G_12152 SS1G_13940 SS1G_13940 SS1G_14433 SS1G_14433
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SS1G_00169Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding. (541 aa)
SS1G_00428Uncharacterized protein. (230 aa)
SS1G_02923Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family. (413 aa)
SS1G_03958Diphosphomevalonate decarboxylase; Belongs to the diphosphomevalonate decarboxylase family. (382 aa)
SS1G_060183-hydroxy-3-methylglutaryl coenzyme A reductase. (1211 aa)
SS1G_06080Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit. (332 aa)
SS1G_06081Mevalonate kinase; Catalyzes the phosphorylation of mevalonate to mevalonate 5- phosphate, a key step in isoprenoid and cholesterol biosynthesis. Belongs to the GHMP kinase family. Mevalonate kinase subfamily. (473 aa)
SS1G_06094CAAX prenyl protease; Proteolytically removes the C-terminal three residues of farnesylated proteins; Belongs to the peptidase M48A family. (461 aa)
SS1G_06102Alkyl transferase; Belongs to the UPP synthase family. (353 aa)
SS1G_07659Farnesyl pyrophosphate synthetase; Belongs to the FPP/GGPP synthase family. (347 aa)
SS1G_07921Prenylcys_lyase domain-containing protein. (573 aa)
SS1G_08637Phosphomevalonate kinase; Belongs to the GHMP kinase family. Mevalonate kinase subfamily. (442 aa)
SS1G_10113Uncharacterized protein; Belongs to the FPP/GGPP synthase family. (378 aa)
SS1G_106443-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase. (455 aa)
SS1G_11088Uncharacterized protein. (220 aa)
SS1G_12152Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family. (400 aa)
SS1G_13940Prenylcys_lyase domain-containing protein. (557 aa)
SS1G_144333-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase. (459 aa)
Your Current Organism:
Sclerotinia sclerotiorum
NCBI taxonomy Id: 665079
Other names: S. sclerotiorum 1980 UF-70, Sclerotinia sclerotiorum 1980 UF-70
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