30 items (Sclerotinia sclerotiorum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SS1G_00901	Uncharacterized protein. (334 aa)
	SS1G_00913	Uncharacterized protein. (71 aa)
	SS1G_01136	TFIIB-type domain-containing protein. (350 aa)
	SS1G_01416	Uncharacterized protein. (363 aa)
	SS1G_04211	Uncharacterized protein. (715 aa)
	SS1G_04596	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (420 aa)
	SS1G_04717	RING-type domain-containing protein. (362 aa)
	SS1G_05650	Uncharacterized protein. (1524 aa)
	SS1G_05728	Uncharacterized protein. (475 aa)
	SS1G_05935	Uncharacterized protein. (643 aa)
	SS1G_06051	Serine/threonine-protein kinase; Belongs to the protein kinase superfamily. (400 aa)
	SS1G_06128	DUF3591 domain-containing protein. (1089 aa)
	SS1G_06696	TATA-box binding protein. (251 aa)
	SS1G_07292	CYCLIN domain-containing protein; Belongs to the cyclin family. (383 aa)
	SS1G_07389	Uncharacterized protein. (817 aa)
	SS1G_07615	General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family. (479 aa)
	SS1G_07704	Uncharacterized protein. (847 aa)
	SS1G_08504	Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (97 aa)
	SS1G_08915	HTH TFE/IIEalpha-type domain-containing protein. (449 aa)
	SS1G_09569	Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...] (192 aa)
	SS1G_09606	Helicase ATP-binding domain-containing protein. (616 aa)
	SS1G_09612	TAF domain-containing protein. (469 aa)
	SS1G_10772	Uncharacterized protein. (141 aa)
	SS1G_11264	TFIID_20kDa domain-containing protein. (705 aa)
	SS1G_11443	NET domain-containing protein. (232 aa)
	SS1G_11654	Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. (297 aa)
	SS1G_12270	Uncharacterized protein. (264 aa)
	SS1G_13425	Uncharacterized protein. (356 aa)
	SS1G_13927	TAFII55_N domain-containing protein. (533 aa)
	SS1G_13928	BTP domain-containing protein. (130 aa)

Your Current Organism:

Sclerotinia sclerotiorum

NCBI taxonomy Id: 665079
Other names: S. sclerotiorum 1980 UF-70, Sclerotinia sclerotiorum 1980 UF-70

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SS1G_00901	SS1G_01136	A7E6H6	A7E760	Uncharacterized protein.	TFIIB-type domain-containing protein.	0.858
SS1G_00901	SS1G_01416	A7E6H6	A7E7Y8	Uncharacterized protein.	Uncharacterized protein.	0.831
SS1G_00901	SS1G_04211	A7E6H6	A7EFX0	Uncharacterized protein.	Uncharacterized protein.	0.816
SS1G_00901	SS1G_04596	A7E6H6	A7EH04	Uncharacterized protein.	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.	0.509
SS1G_00901	SS1G_04717	A7E6H6	A7EHC5	Uncharacterized protein.	RING-type domain-containing protein.	0.509
SS1G_00901	SS1G_05650	A7E6H6	A7EK04	Uncharacterized protein.	Uncharacterized protein.	0.997
SS1G_00901	SS1G_05728	A7E6H6	A7EK82	Uncharacterized protein.	Uncharacterized protein.	0.833
SS1G_00901	SS1G_05935	A7E6H6	A7EKT8	Uncharacterized protein.	Uncharacterized protein.	0.509
SS1G_00901	SS1G_06051	A7E6H6	A7EL54	Uncharacterized protein.	Serine/threonine-protein kinase; Belongs to the protein kinase superfamily.	0.718
SS1G_00901	SS1G_06128	A7E6H6	A7ELD1	Uncharacterized protein.	DUF3591 domain-containing protein.	0.996
SS1G_00901	SS1G_06696	A7E6H6	A7EMZ7	Uncharacterized protein.	TATA-box binding protein.	0.997
SS1G_00901	SS1G_07292	A7E6H6	A7EPP3	Uncharacterized protein.	CYCLIN domain-containing protein; Belongs to the cyclin family.	0.509
SS1G_00901	SS1G_07389	A7E6H6	A7EPZ0	Uncharacterized protein.	Uncharacterized protein.	0.999
SS1G_00901	SS1G_07615	A7E6H6	A7EQL3	Uncharacterized protein.	General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family.	0.447
SS1G_00901	SS1G_07704	A7E6H6	A7EQV1	Uncharacterized protein.	Uncharacterized protein.	0.515
SS1G_00901	SS1G_08504	A7E6H6	A7ET49	Uncharacterized protein.	Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family.	0.773
SS1G_00901	SS1G_08915	A7E6H6	A7EUA8	Uncharacterized protein.	HTH TFE/IIEalpha-type domain-containing protein.	0.819
SS1G_00901	SS1G_09569	A7E6H6	A7EW60	Uncharacterized protein.	Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...]	0.997
SS1G_00901	SS1G_09606	A7E6H6	A7EW97	Uncharacterized protein.	Helicase ATP-binding domain-containing protein.	0.509
SS1G_00901	SS1G_09612	A7E6H6	A7EWA3	Uncharacterized protein.	TAF domain-containing protein.	0.999