(8 nodes) Pwp2p-containing subcomplex of 90S preribosome network (Bipolaris sorokiniana)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	M2R0P1_COCSN	Uncharacterized protein. (1058 aa)
	M2RQN3_COCSN	Uncharacterized protein. (443 aa)
	M2RS01_COCSN	Utp12 domain-containing protein. (425 aa)
	M2SIQ7_COCSN	WD_REPEATS_REGION domain-containing protein. (888 aa)
	M2T1V1_COCSN	WD_REPEATS_REGION domain-containing protein. (963 aa)
	M2T677_COCSN	Polysaccharide lyase family 3 protein. (236 aa)
	M2TD86_COCSN	Uncharacterized protein. (663 aa)
	M2TM02_COCSN	Uncharacterized protein. (978 aa)

Your Current Organism:

Bipolaris sorokiniana

NCBI taxonomy Id: 665912
Other names: B. sorokiniana ND90Pr, Bipolaris sorokiniana ND90Pr, Cochliobolus sativus ND90Pr

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
M2R0P1_COCSN	M2RQN3_COCSN	M2R0P1	M2RQN3	Uncharacterized protein.	Uncharacterized protein.	0.999
M2R0P1_COCSN	M2RS01_COCSN	M2R0P1	M2RS01	Uncharacterized protein.	Utp12 domain-containing protein.	0.999
M2R0P1_COCSN	M2SIQ7_COCSN	M2R0P1	M2SIQ7	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.999
M2R0P1_COCSN	M2T1V1_COCSN	M2R0P1	M2T1V1	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.999
M2R0P1_COCSN	M2T677_COCSN	M2R0P1	M2T677	Uncharacterized protein.	Polysaccharide lyase family 3 protein.	0.989
M2R0P1_COCSN	M2TD86_COCSN	M2R0P1	M2TD86	Uncharacterized protein.	Uncharacterized protein.	0.999
M2RQN3_COCSN	M2R0P1_COCSN	M2RQN3	M2R0P1	Uncharacterized protein.	Uncharacterized protein.	0.999
M2RQN3_COCSN	M2RS01_COCSN	M2RQN3	M2RS01	Uncharacterized protein.	Utp12 domain-containing protein.	0.998
M2RQN3_COCSN	M2SIQ7_COCSN	M2RQN3	M2SIQ7	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.999
M2RQN3_COCSN	M2T1V1_COCSN	M2RQN3	M2T1V1	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.999
M2RQN3_COCSN	M2T677_COCSN	M2RQN3	M2T677	Uncharacterized protein.	Polysaccharide lyase family 3 protein.	0.983
M2RQN3_COCSN	M2TD86_COCSN	M2RQN3	M2TD86	Uncharacterized protein.	Uncharacterized protein.	0.999
M2RS01_COCSN	M2R0P1_COCSN	M2RS01	M2R0P1	Utp12 domain-containing protein.	Uncharacterized protein.	0.999
M2RS01_COCSN	M2RQN3_COCSN	M2RS01	M2RQN3	Utp12 domain-containing protein.	Uncharacterized protein.	0.998
M2RS01_COCSN	M2SIQ7_COCSN	M2RS01	M2SIQ7	Utp12 domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.999
M2RS01_COCSN	M2T1V1_COCSN	M2RS01	M2T1V1	Utp12 domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.998
M2RS01_COCSN	M2T677_COCSN	M2RS01	M2T677	Utp12 domain-containing protein.	Polysaccharide lyase family 3 protein.	0.979
M2RS01_COCSN	M2TD86_COCSN	M2RS01	M2TD86	Utp12 domain-containing protein.	Uncharacterized protein.	0.999
M2SIQ7_COCSN	M2R0P1_COCSN	M2SIQ7	M2R0P1	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.999
M2SIQ7_COCSN	M2RQN3_COCSN	M2SIQ7	M2RQN3	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.999