(136 nodes) WD40 repeat network (Bipolaris sorokiniana)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	M2R254_COCSN	Uncharacterized protein. (490 aa)
	M2R0P1_COCSN	Uncharacterized protein. (1058 aa)
	M2R0M0_COCSN	WD_REPEATS_REGION domain-containing protein. (1061 aa)
	M2QZW3_COCSN	Uncharacterized protein. (749 aa)
	M2QZ42_COCSN	Uncharacterized protein. (770 aa)
	M2QXF6_COCSN	Uncharacterized protein. (1299 aa)
	M2QVJ7_COCSN	WD_REPEATS_REGION domain-containing protein. (224 aa)
	M2QVG6_COCSN	WD_REPEATS_REGION domain-containing protein. (235 aa)
	M2QSU5_COCSN	Uncharacterized protein. (1178 aa)
	M2QVD6_COCSN	Uncharacterized protein. (1266 aa)
	M2SIM7_COCSN	Uncharacterized protein. (636 aa)
	M2SIQ7_COCSN	WD_REPEATS_REGION domain-containing protein. (888 aa)
	M2SJ78_COCSN	WD_REPEATS_REGION domain-containing protein. (334 aa)
	M2SJG9_COCSN	Glycoside hydrolase family 1 protein. (1279 aa)
	M2SJJ8_COCSN	WD_REPEATS_REGION domain-containing protein. (433 aa)
	M2SLF0_COCSN	Uncharacterized protein. (1465 aa)
	M2SLN2_COCSN	Protein phosphatase PP2A regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family. (484 aa)
	PAC1	Nuclear distribution protein PAC1; Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein-mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for nuclear migration during vegetative growth as well as development. Required for retrograde early endosome (EE) transport from the hyphal tip. Required for localization of dynein to the mitotic spindle poles. Recruits additional proteins to the dynein complex at SPBs; Belongs to the WD repeat LIS1/nudF family. (459 aa)
	M2SMS7_COCSN	Uncharacterized protein. (1180 aa)
	M2SN26_COCSN	Uncharacterized protein. (685 aa)
	M2SN59_COCSN	Uncharacterized protein. (1355 aa)
	M2SNN4_COCSN	WD_REPEATS_REGION domain-containing protein. (937 aa)
	M2SP55_COCSN	WD_REPEATS_REGION domain-containing protein. (554 aa)
	M2SPK8_COCSN	Uncharacterized protein. (805 aa)
	M2SPS3_COCSN	Uncharacterized protein. (1386 aa)
	M2SQA8_COCSN	Uncharacterized protein. (1088 aa)
	M2SQF1_COCSN	Uncharacterized protein. (1128 aa)
	M2SQP7_COCSN	Uncharacterized protein. (428 aa)
	M2SQZ4_COCSN	WD_REPEATS_REGION domain-containing protein. (890 aa)
	M2SRC6_COCSN	WD_REPEATS_REGION domain-containing protein. (1359 aa)
	M2SRL7_COCSN	Uncharacterized protein. (1014 aa)
	M2SS37_COCSN	WD_REPEATS_REGION domain-containing protein. (602 aa)
	M2SS63_COCSN	Uncharacterized protein. (489 aa)
	M2SSB6_COCSN	WD_REPEATS_REGION domain-containing protein. (372 aa)
	M2SSY8_COCSN	WD_REPEATS_REGION domain-containing protein. (752 aa)
	M2STP8_COCSN	WD_REPEATS_REGION domain-containing protein. (328 aa)
	M2STW0_COCSN	Uncharacterized protein. (1090 aa)
	M2STX7_COCSN	Zinc_ribbon_16 domain-containing protein. (983 aa)
	M2SU93_COCSN	WD_REPEATS_REGION domain-containing protein. (606 aa)
	M2SUI8_COCSN	WD_REPEATS_REGION domain-containing protein. (1124 aa)
	M2SUT1_COCSN	WD_REPEATS_REGION domain-containing protein. (543 aa)
	M2SVG6_COCSN	WD_REPEATS_REGION domain-containing protein. (453 aa)
	M2SW46_COCSN	Uncharacterized protein. (982 aa)
	M2SWH5_COCSN	WD_REPEATS_REGION domain-containing protein. (1241 aa)
	M2SWI8_COCSN	Uncharacterized protein. (2628 aa)
	ERB1	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (703 aa)
	M2SY85_COCSN	WD_REPEATS_REGION domain-containing protein. (379 aa)
	M2SYL0_COCSN	WD_REPEATS_REGION domain-containing protein. (511 aa)
	M2SZJ4_COCSN	Uncharacterized protein. (565 aa)
	M2SZN0_COCSN	WD_REPEATS_REGION domain-containing protein. (597 aa)
	M2T0A7_COCSN	Uncharacterized protein. (1066 aa)
	M2T1I8_COCSN	WD_REPEATS_REGION domain-containing protein. (649 aa)
	M2T1V1_COCSN	WD_REPEATS_REGION domain-containing protein. (963 aa)
	M2T234_COCSN	WD_REPEATS_REGION domain-containing protein. (798 aa)
	M2T2C3_COCSN	Uncharacterized protein. (1008 aa)
	M2T2E6_COCSN	WD_REPEATS_REGION domain-containing protein. (57 aa)
	M2T435_COCSN	WD_REPEATS_REGION domain-containing protein. (1624 aa)
	M2T4H0_COCSN	Coronin; Belongs to the WD repeat coronin family. (620 aa)
	M2T4I9_COCSN	WD_REPEATS_REGION domain-containing protein. (1250 aa)
	M2T5I4_COCSN	Uncharacterized protein. (922 aa)
	M2T5X6_COCSN	WD_REPEATS_REGION domain-containing protein. (301 aa)
	M2T5Z8_COCSN	Coatomer subunit beta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. (860 aa)
	M2T6M0_COCSN	Uncharacterized protein. (471 aa)
	M2T7U4_COCSN	WD_REPEATS_REGION domain-containing protein. (771 aa)
	M2T7Z7_COCSN	WD_REPEATS_REGION domain-containing protein. (493 aa)
	M2T8P3_COCSN	WD_REPEATS_REGION domain-containing protein. (1417 aa)
	M2T9S2_COCSN	Uncharacterized protein. (1150 aa)
	M2TAE7_COCSN	DNA damage-binding protein CMR1; DNA-binding protein that binds to both single- and double- stranded DNA. Binds preferentially to UV-damaged DNA. May be involved in DNA-metabolic processes. (522 aa)
	M2TC06_COCSN	WD_REPEATS_REGION domain-containing protein. (607 aa)
	TRM82	tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit TRM82; Required for the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. In the complex, it is required to stabilize and induce conformational changes of the catalytic subunit. Belongs to the WD repeat TRM82 family. (476 aa)
	M2TCX5_COCSN	WD_REPEATS_REGION domain-containing protein. (671 aa)
	M2TD31_COCSN	WD_REPEATS_REGION domain-containing protein. (317 aa)
	M2TD86_COCSN	Uncharacterized protein. (663 aa)
	M2TE01_COCSN	WD_REPEATS_REGION domain-containing protein. (531 aa)
	M2TE46_COCSN	WD_REPEATS_REGION domain-containing protein. (594 aa)
	M2TEQ7_COCSN	Uncharacterized protein. (816 aa)
	M2S917_COCSN	Uncharacterized protein. (688 aa)
	M2S8P6_COCSN	WD_REPEATS_REGION domain-containing protein. (867 aa)
	M2S886_COCSN	Uncharacterized protein. (1463 aa)
	M2S9M8_COCSN	WD_REPEATS_REGION domain-containing protein. (378 aa)
	M2TGP0_COCSN	WD_REPEATS_REGION domain-containing protein. (317 aa)
	M2THC9_COCSN	Uncharacterized protein. (897 aa)
	M2THN4_COCSN	Uncharacterized protein. (729 aa)
	M2TIE1_COCSN	Uncharacterized protein. (1176 aa)
	M2TJ46_COCSN	Uncharacterized protein. (1292 aa)
	M2TK54_COCSN	Uncharacterized protein. (1072 aa)
	M2TFM7_COCSN	Uncharacterized protein. (923 aa)
	M2TKI1_COCSN	Uncharacterized protein. (898 aa)
	M2TKY1_COCSN	WD_REPEATS_REGION domain-containing protein. (342 aa)
	M2TL29_COCSN	Uncharacterized protein. (1531 aa)
	M2TLG9_COCSN	WD_REPEATS_REGION domain-containing protein. (474 aa)
	M2TMU9_COCSN	WD_REPEATS_REGION domain-containing protein. (688 aa)
	M2TN78_COCSN	Uncharacterized protein. (1393 aa)
	M2S9Y6_COCSN	WD_REPEATS_REGION domain-containing protein. (1327 aa)
	M2SA79_COCSN	Uncharacterized protein. (919 aa)
	M2SB23_COCSN	WD_REPEATS_REGION domain-containing protein. (483 aa)
	M2SB87_COCSN	WD_REPEATS_REGION domain-containing protein. (621 aa)
	M2SBZ4_COCSN	WD_REPEATS_REGION domain-containing protein. (546 aa)
	M2SCA6_COCSN	WD_REPEATS_REGION domain-containing protein. (351 aa)
	M2SCE3_COCSN	WD_REPEATS_REGION domain-containing protein. (679 aa)
	M2SCS5_COCSN	Uncharacterized protein. (1276 aa)
	M2SD20_COCSN	WD_REPEATS_REGION domain-containing protein. (379 aa)
	M2SD36_COCSN	WD_REPEATS_REGION domain-containing protein. (880 aa)
	M2SE80_COCSN	WD_REPEATS_REGION domain-containing protein. (455 aa)
	M2SEQ2_COCSN	WD_REPEATS_REGION domain-containing protein. (693 aa)
	M2SER1_COCSN	Uncharacterized protein. (896 aa)
	M2SFD6_COCSN	Uncharacterized protein. (867 aa)
	M2SGB6_COCSN	Coatomer subunit alpha; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. (1214 aa)
	M2SGU5_COCSN	WD_REPEATS_REGION domain-containing protein. (499 aa)
	M2SH53_COCSN	WD_REPEATS_REGION domain-containing protein. (512 aa)
	YTM1	Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (1277 aa)
	M2S7U8_COCSN	WD_REPEATS_REGION domain-containing protein. (515 aa)
	M2S7T5_COCSN	WD_REPEATS_REGION domain-containing protein. (663 aa)
	M2S7A1_COCSN	Uncharacterized protein. (1476 aa)
	M2S6U7_COCSN	WD_REPEATS_REGION domain-containing protein. (713 aa)
	M2S6C2_COCSN	WD_REPEATS_REGION domain-containing protein. (546 aa)
	CIA1	Probable cytosolic iron-sulfur protein assembly protein 1; Essential component of the cytosolic iron-sulfur (Fe/S) protein assembly machinery. Required for the maturation of extramitochondrial Fe/S proteins. (439 aa)
	M2S4U1_COCSN	WD_REPEATS_REGION domain-containing protein. (908 aa)
	M2S255_COCSN	WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family. (298 aa)
	M2S248_COCSN	Uncharacterized protein. (1307 aa)
	M2RZ81_COCSN	WD_REPEATS_REGION domain-containing protein. (392 aa)
	M2RXM1_COCSN	WD_REPEATS_REGION domain-containing protein. (359 aa)
	TIF34	Eukaryotic translation initiation factor 3 subunit I; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (340 aa)
	M2RSL0_COCSN	Uncharacterized protein. (1499 aa)
	M2RP54_COCSN	Uncharacterized protein. (363 aa)
	M2RNW6_COCSN	WD_REPEATS_REGION domain-containing protein. (316 aa)
	M2RJB6_COCSN	WD_REPEATS_REGION domain-containing protein. (446 aa)
	M2RHY2_COCSN	WD_REPEATS_REGION domain-containing protein. (354 aa)
	M2RFZ9_COCSN	WD_REPEATS_REGION domain-containing protein. (552 aa)
	M2RFR7_COCSN	LisH domain-containing protein. (461 aa)
	M2RD40_COCSN	Uncharacterized protein; Belongs to the WD repeat SEC13 family. (505 aa)
	M2R8X6_COCSN	WD_REPEATS_REGION domain-containing protein. (676 aa)
	M2R4M0_COCSN	Uncharacterized protein. (508 aa)
	M2R4F7_COCSN	Actin-related protein 2/3 complex subunit; Functions as component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks; Belongs to the WD repeat ARPC1 family. (364 aa)
	M2R3L7_COCSN	WD_REPEATS_REGION domain-containing protein. (456 aa)
	M2R3C5_COCSN	Protein HIR; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family. (1067 aa)

Your Current Organism:

Bipolaris sorokiniana

NCBI taxonomy Id: 665912
Other names: B. sorokiniana ND90Pr, Bipolaris sorokiniana ND90Pr, Cochliobolus sativus ND90Pr

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CIA1	M2RJB6_COCSN	M2S689	M2RJB6	Probable cytosolic iron-sulfur protein assembly protein 1; Essential component of the cytosolic iron-sulfur (Fe/S) protein assembly machinery. Required for the maturation of extramitochondrial Fe/S proteins.	WD_REPEATS_REGION domain-containing protein.	0.430
ERB1	M2R0M0_COCSN	M2SY16	M2R0M0	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	WD_REPEATS_REGION domain-containing protein.	0.699
ERB1	M2R0P1_COCSN	M2SY16	M2R0P1	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Uncharacterized protein.	0.875
ERB1	M2R4M0_COCSN	M2SY16	M2R4M0	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Uncharacterized protein.	0.695
ERB1	M2R8X6_COCSN	M2SY16	M2R8X6	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	WD_REPEATS_REGION domain-containing protein.	0.448
ERB1	M2RFZ9_COCSN	M2SY16	M2RFZ9	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	WD_REPEATS_REGION domain-containing protein.	0.966
ERB1	M2RJB6_COCSN	M2SY16	M2RJB6	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	WD_REPEATS_REGION domain-containing protein.	0.493
ERB1	M2S4U1_COCSN	M2SY16	M2S4U1	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	WD_REPEATS_REGION domain-containing protein.	0.915
ERB1	M2S7A1_COCSN	M2SY16	M2S7A1	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Uncharacterized protein.	0.637
ERB1	M2SA79_COCSN	M2SY16	M2SA79	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Uncharacterized protein.	0.577
ERB1	M2SB87_COCSN	M2SY16	M2SB87	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	WD_REPEATS_REGION domain-containing protein.	0.448
ERB1	M2SER1_COCSN	M2SY16	M2SER1	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Uncharacterized protein.	0.658
ERB1	M2SH53_COCSN	M2SY16	M2SH53	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	WD_REPEATS_REGION domain-containing protein.	0.532
ERB1	M2SIQ7_COCSN	M2SY16	M2SIQ7	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	WD_REPEATS_REGION domain-containing protein.	0.871
ERB1	M2SP55_COCSN	M2SY16	M2SP55	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	WD_REPEATS_REGION domain-containing protein.	0.855
ERB1	M2SS37_COCSN	M2SY16	M2SS37	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	WD_REPEATS_REGION domain-containing protein.	0.448
ERB1	M2SU93_COCSN	M2SY16	M2SU93	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	WD_REPEATS_REGION domain-containing protein.	0.448
ERB1	M2SUI8_COCSN	M2SY16	M2SUI8	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	WD_REPEATS_REGION domain-containing protein.	0.403
ERB1	M2SUT1_COCSN	M2SY16	M2SUT1	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	WD_REPEATS_REGION domain-containing protein.	0.482
ERB1	M2SYL0_COCSN	M2SY16	M2SYL0	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	WD_REPEATS_REGION domain-containing protein.	0.917