(79 nodes) Translesion synthesis by POLK network (Bipolaris sorokiniana)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	M2SMC7_COCSN	Amino_oxidase domain-containing protein. (519 aa)
	M2RNB7_COCSN	Uncharacterized protein. (305 aa)
	M2RG62_COCSN	CCHC-type domain-containing protein. (121 aa)
	M2RBB5_COCSN	Uncharacterized protein. (61 aa)
	M2RA37_COCSN	Uncharacterized protein. (1207 aa)
	M2R517_COCSN	Uncharacterized protein. (104 aa)
	M2R083_COCSN	Uncharacterized protein. (49 aa)
	M2R023_COCSN	Uncharacterized protein. (49 aa)
	M2QSN8_COCSN	Uncharacterized protein. (61 aa)
	M2QSJ7_COCSN	Uncharacterized protein. (96 aa)
	M2SL30_COCSN	Uncharacterized protein. (51 aa)
	M2SLN4_COCSN	Uncharacterized protein. (55 aa)
	M2SLT6_COCSN	Uncharacterized protein. (63 aa)
	M2SLU6_COCSN	Uncharacterized protein. (49 aa)
	M2SLX8_COCSN	CCHC-type domain-containing protein. (397 aa)
	M2SLY2_COCSN	Uncharacterized protein. (63 aa)
	M2SLY6_COCSN	Uncharacterized protein. (94 aa)
	M2SM38_COCSN	Uncharacterized protein. (49 aa)
	M2SM64_COCSN	Uncharacterized protein. (223 aa)
	M2SMV1_COCSN	Uncharacterized protein. (49 aa)
	M2SMV5_COCSN	Integrase_H2C2 domain-containing protein. (104 aa)
	M2SN28_COCSN	Uncharacterized protein. (440 aa)
	M2SN33_COCSN	Uncharacterized protein. (52 aa)
	M2SNV7_COCSN	Uncharacterized protein. (168 aa)
	M2SP98_COCSN	CCHC-type domain-containing protein. (246 aa)
	M2SQ02_COCSN	Uncharacterized protein. (108 aa)
	M2SQK2_COCSN	Zds_C domain-containing protein. (986 aa)
	M2SRJ4_COCSN	Uncharacterized protein. (49 aa)
	M2SRK0_COCSN	Uncharacterized protein. (76 aa)
	M2SRY6_COCSN	Integrase_H2C2 domain-containing protein. (145 aa)
	M2SSP7_COCSN	Uncharacterized protein. (54 aa)
	M2STF6_COCSN	Uncharacterized protein. (51 aa)
	M2STK5_COCSN	UmuC domain-containing protein. (610 aa)
	M2STU6_COCSN	Uncharacterized protein. (430 aa)
	M2SUI7_COCSN	Uncharacterized protein. (49 aa)
	M2SV00_COCSN	Uncharacterized protein. (89 aa)
	M2SZT8_COCSN	Uncharacterized protein. (63 aa)
	M2TM15_COCSN	Uncharacterized protein. (320 aa)
	M2TL34_COCSN	CCHC-type domain-containing protein. (342 aa)
	M2TJW8_COCSN	Uncharacterized protein. (95 aa)
	M2T1I2_COCSN	Uncharacterized protein. (75 aa)
	M2T100_COCSN	Reverse transcriptase domain-containing protein. (73 aa)
	M2TII7_COCSN	Zn(2)-C6 fungal-type domain-containing protein. (484 aa)
	M2TI97_COCSN	Uncharacterized protein. (66 aa)
	M2TBA7_COCSN	Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism. (611 aa)
	M2TB64_COCSN	Uncharacterized protein. (73 aa)
	M2TB60_COCSN	Uncharacterized protein. (266 aa)
	M2T7Q1_COCSN	Reverse transcriptase domain-containing protein. (74 aa)
	M2T7E4_COCSN	AAA domain-containing protein. (1262 aa)
	M2T611_COCSN	Uncharacterized protein. (84 aa)
	M2T605_COCSN	Uncharacterized protein. (63 aa)
	M2T569_COCSN	Uncharacterized protein. (92 aa)
	M2T566_COCSN	Uncharacterized protein. (62 aa)
	M2T3Q6_COCSN	Uncharacterized protein. (64 aa)
	M2T364_COCSN	Ubiquitin-like domain-containing protein. (154 aa)
	M2T2S6_COCSN	Uncharacterized protein. (49 aa)
	M2SKN9_COCSN	Uncharacterized protein. (74 aa)
	M2SGT8_COCSN	BZIP domain-containing protein. (238 aa)
	M2SFU1_COCSN	Uncharacterized protein. (133 aa)
	M2SFP6_COCSN	Uncharacterized protein. (190 aa)
	M2SE44_COCSN	Uncharacterized protein. (61 aa)
	M2SDY3_COCSN	Uncharacterized protein. (51 aa)
	M2SBG3_COCSN	Uncharacterized protein. (168 aa)
	M2SAP8_COCSN	Reverse transcriptase domain-containing protein. (74 aa)
	M2S9D4_COCSN	Uncharacterized protein. (49 aa)
	M2S996_COCSN	Uncharacterized protein. (66 aa)
	M2S866_COCSN	Uncharacterized protein. (139 aa)
	M2S744_COCSN	Uncharacterized protein. (55 aa)
	M2S6Z6_COCSN	Uncharacterized protein. (49 aa)
	M2S6Y4_COCSN	Uncharacterized protein. (76 aa)
	M2S6X1_COCSN	Uncharacterized protein. (49 aa)
	M2S6N9_COCSN	Uncharacterized protein. (76 aa)
	M2RU60_COCSN	Uncharacterized protein. (64 aa)
	M2RTF7_COCSN	Uncharacterized protein. (49 aa)
	M2RTC0_COCSN	Uncharacterized protein. (64 aa)
	M2RSH6_COCSN	Uncharacterized protein. (49 aa)
	M2RS67_COCSN	Uncharacterized protein. (129 aa)
	M2RQU2_COCSN	Integrase_H2C2 domain-containing protein. (127 aa)
	M2RQC4_COCSN	Uncharacterized protein. (50 aa)

Your Current Organism:

Bipolaris sorokiniana

NCBI taxonomy Id: 665912
Other names: B. sorokiniana ND90Pr, Bipolaris sorokiniana ND90Pr, Cochliobolus sativus ND90Pr

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
M2RA37_COCSN	M2RNB7_COCSN	M2RA37	M2RNB7	Uncharacterized protein.	Uncharacterized protein.	0.816
M2RA37_COCSN	M2SGT8_COCSN	M2RA37	M2SGT8	Uncharacterized protein.	BZIP domain-containing protein.	0.628
M2RA37_COCSN	M2STK5_COCSN	M2RA37	M2STK5	Uncharacterized protein.	UmuC domain-containing protein.	0.916
M2RA37_COCSN	M2T364_COCSN	M2RA37	M2T364	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.628
M2RA37_COCSN	M2T7E4_COCSN	M2RA37	M2T7E4	Uncharacterized protein.	AAA domain-containing protein.	0.581
M2RA37_COCSN	M2TBA7_COCSN	M2RA37	M2TBA7	Uncharacterized protein.	Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.	0.516
M2RNB7_COCSN	M2RA37_COCSN	M2RNB7	M2RA37	Uncharacterized protein.	Uncharacterized protein.	0.816
M2RNB7_COCSN	M2SGT8_COCSN	M2RNB7	M2SGT8	Uncharacterized protein.	BZIP domain-containing protein.	0.926
M2RNB7_COCSN	M2STK5_COCSN	M2RNB7	M2STK5	Uncharacterized protein.	UmuC domain-containing protein.	0.665
M2RNB7_COCSN	M2T364_COCSN	M2RNB7	M2T364	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.994
M2RNB7_COCSN	M2T7E4_COCSN	M2RNB7	M2T7E4	Uncharacterized protein.	AAA domain-containing protein.	0.608
M2RNB7_COCSN	M2TBA7_COCSN	M2RNB7	M2TBA7	Uncharacterized protein.	Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.	0.600
M2RNB7_COCSN	M2TII7_COCSN	M2RNB7	M2TII7	Uncharacterized protein.	Zn(2)-C6 fungal-type domain-containing protein.	0.816
M2SAP8_COCSN	M2SLY6_COCSN	M2SAP8	M2SLY6	Reverse transcriptase domain-containing protein.	Uncharacterized protein.	0.520
M2SAP8_COCSN	M2SRK0_COCSN	M2SAP8	M2SRK0	Reverse transcriptase domain-containing protein.	Uncharacterized protein.	0.423
M2SAP8_COCSN	M2T1I2_COCSN	M2SAP8	M2T1I2	Reverse transcriptase domain-containing protein.	Uncharacterized protein.	0.522
M2SGT8_COCSN	M2RA37_COCSN	M2SGT8	M2RA37	BZIP domain-containing protein.	Uncharacterized protein.	0.628
M2SGT8_COCSN	M2RNB7_COCSN	M2SGT8	M2RNB7	BZIP domain-containing protein.	Uncharacterized protein.	0.926
M2SGT8_COCSN	M2STK5_COCSN	M2SGT8	M2STK5	BZIP domain-containing protein.	UmuC domain-containing protein.	0.643
M2SGT8_COCSN	M2T7E4_COCSN	M2SGT8	M2T7E4	BZIP domain-containing protein.	AAA domain-containing protein.	0.453