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ASAC_0064 ASAC_0064 ASAC_0108 ASAC_0108 srp19 srp19 cmk cmk ASAC_0139 ASAC_0139 ASAC_0140 ASAC_0140 ef1b ef1b ASAC_0170 ASAC_0170 rpl14e rpl14e ASAC_0186 ASAC_0186 rnz rnz ASAC_0193 ASAC_0193 tbp tbp rpl44e rpl44e nop10 nop10 ASAC_0207 ASAC_0207 ASAC_0219 ASAC_0219 rps8 rps8 rps14 rps14 rpl5 rpl5 rps4e rps4e rpl24 rpl24 rpl14 rpl14 rps17 rps17 rpl29 rpl29 rps3 rps3 rpl22 rpl22 rps19p rps19p rpl11 rpl11 rpl12 rpl12 rpl10 rpl10 rpl1 rpl1 eif2b eif2b ASAC_0278 ASAC_0278 prf1 prf1 tfe tfe rps17e rps17e ASAC_0367 ASAC_0367 fusA fusA proS proS ASAC_0399 ASAC_0399 ASAC_0403 ASAC_0403 ASAC_0414 ASAC_0414 ASAC_0423 ASAC_0423 rpoK rpoK rpl21e rpl21e ASAC_0427 ASAC_0427 ASAC_0429 ASAC_0429 map map ASAC_0444 ASAC_0444 ASAC_0455 ASAC_0455 pelA pelA ASAC_0488 ASAC_0488 ASAC_0511 ASAC_0511 nac nac ASAC_0552 ASAC_0552 ASAC_0553 ASAC_0553 rps27ae rps27ae rps24e rps24e ASAC_0710 ASAC_0710 ASAC_0786 ASAC_0786 rtcA rtcA ASAC_0849 ASAC_0849 ASAC_0914 ASAC_0914 rpl37e rpl37e ASAC_0926 ASAC_0926 rpl23 rpl23 rpl4 rpl4 ASAC_0936 ASAC_0936 spt5 spt5 secE secE ASAC_0966 ASAC_0966 rps2 rps2 ASAC_1004 ASAC_1004 rps9 rps9 rpl13 rpl13 rpl18e rpl18e rpoD rpoD rps11 rps11 rps4 rps4 rps13 rps13 rpl7ae rpl7ae ASAC_1068 ASAC_1068 ASAC_1071 ASAC_1071 rps28e rps28e infB infB ASAC_1096 ASAC_1096 eif2g eif2g rps6e rps6e rps15 rps15 rps3ae rps3ae ASAC_1104 ASAC_1104 rpl40e rpl40e ASAC_1110 ASAC_1110 rpl18a rpl18a ftsY ftsY ASAC_1119 ASAC_1119 ASAC_1126 ASAC_1126 rpl39e rpl39e ASAC_1128 ASAC_1128 eif6 eif6 rpl15e rpl15e ASAC_1135 ASAC_1135 rpl37ae rpl37ae rrp42 rrp42 rrp41 rrp41 rrp4 rrp4 ASAC_1140 ASAC_1140 rpl24e rpl24e ASAC_1163 ASAC_1163 ASAC_1174 ASAC_1174 ASAC_1175 ASAC_1175 ASAC_1176 ASAC_1176 rpoA2 rpoA2 rpl30e rpl30e nusA nusA rps12 rps12 rps7 rps7 tuf tuf rps10 rps10 ASAC_1193 ASAC_1193 csl4 csl4 ASAC_1197 ASAC_1197 rps19e rps19e rpl6 rpl6 ASAC_1221 ASAC_1221 rpl19e rpl19e rpl18 rpl18 rps5 rps5 rpl30 rpl30 rpl15 rpl15 rpl10e rpl10e eif5a eif5a tfb tfb ASAC_1248 ASAC_1248 ASAC_1251 ASAC_1251 rps8e rps8e rpl2 rpl2 ASAC_1305 ASAC_1305 ASAC_1306 ASAC_1306 ASAC_1313 ASAC_1313 flpA flpA dnaG dnaG ASAC_1361 ASAC_1361 eif1a eif1a ASAC_1363 ASAC_1363 ASAC_1364 ASAC_1364 nep1 nep1 ASAC_1439 ASAC_1439 tmcA tmcA srp54 srp54
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Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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ASAC_0064NAD-dependent epimerase/dehydratase. (309 aa)
ASAC_0108Phosphatidyl ethanolamine-binding protein (PEBP). (171 aa)
srp19Signal recognition particle protein Srp19; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds directly to 7S RNA and mediates binding of the 54 kDa subunit of the SRP. (96 aa)
cmkCytidylate kinase, putative. (185 aa)
ASAC_0139Hypothetical protein. (80 aa)
ASAC_0140Translation initiation factor Sui1; Belongs to the SUI1 family. (101 aa)
ef1bElongation factor 1-beta; Promotes the exchange of GDP for GTP in EF-1-alpha/GDP, thus allowing the regeneration of EF-1-alpha/GTP that could then be used to form the ternary complex EF-1-alpha/GTP/AAtRNA. (88 aa)
ASAC_0170Predicted Zn-ribbon RNA-binding protein. (69 aa)
rpl14e50S ribosomal protein L14e; Belongs to the eukaryotic ribosomal protein eL14 family. (96 aa)
ASAC_0186Hypothetical protein. (166 aa)
rnzRibonuclease Z; Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA; Belongs to the RNase Z family. (293 aa)
ASAC_0193Putative methyltransferase. (336 aa)
tbpTATA-box-binding protein; General factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Binds specifically to the TATA box promoter element which lies close to the position of transcription initiation. (207 aa)
rpl44e50S ribosomal protein L44E; Binds to the 23S rRNA. (95 aa)
nop10Nucleolar RNA-binding protein Nop10p; Involved in ribosome biogenesis; more specifically in 18S rRNA pseudouridylation and in cleavage of pre-rRNA. (57 aa)
ASAC_0207Preprotein translocase subunit secY; Belongs to the SecY/SEC61-alpha family. (453 aa)
ASAC_0219Probable deoxyhypusine synthase. (319 aa)
rps830S ribosomal protein S8P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family. (132 aa)
rps1430S ribosomal protein S14P; Binds 16S rRNA, required for the assembly of 30S particles. (56 aa)
rpl550S ribosomal protein L5P; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. May contact the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs. (188 aa)
rps4e30S ribosomal protein S4e; Belongs to the eukaryotic ribosomal protein eS4 family. (250 aa)
rpl2450S ribosomal protein L24P; Located at the polypeptide exit tunnel on the outside of the subunit. (136 aa)
rpl1450S ribosomal protein L14P; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. (140 aa)
rps1730S ribosomal protein S17P; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. (114 aa)
rpl2950S ribosomal protein L29P; Belongs to the universal ribosomal protein uL29 family. (86 aa)
rps330S ribosomal protein S3P; Binds the lower part of the 30S subunit head. Belongs to the universal ribosomal protein uS3 family. (238 aa)
rpl2250S ribosomal protein L22P; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome. (159 aa)
rps19p30S ribosomal protein S19P; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA. (141 aa)
rpl1150S ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors; Belongs to the universal ribosomal protein uL11 family. (169 aa)
rpl12Hypothetical protein; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the eukaryotic ribosomal protein P1/P2 family. (114 aa)
rpl10LSU ribosomal protein L10P; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. (344 aa)
rpl150S ribosomal protein L1P; Binds directly to 23S rRNA. Probably involved in E site tRNA release. (214 aa)
eif2bTranslation initiation factor IF-2 subunit beta; eIF-2 functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA. Belongs to the eIF-2-beta/eIF-5 family. (158 aa)
ASAC_0278Oligosaccharyl transferase STT3 subunit. (804 aa)
prf1Peptide chain release factor subunit 1; Directs the termination of nascent peptide synthesis (translation) in response to the termination codons UAA, UAG and UGA. (403 aa)
tfeTranscription initiation factor IIE, alpha subunit; Transcription factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Facilitates transcription initiation by enhancing TATA-box recognition by TATA-box-binding protein (Tbp), and transcription factor B (Tfb) and RNA polymerase recruitment. Not absolutely required for transcription in vitro, but particularly important in cases where Tbp or Tfb function is not optimal. It dynamically alters the nucleic acid-binding properties of RNA polymerases by stabilizing the initiation complex and destabilizing [...] (194 aa)
rps17e30S ribosomal protein S17e; Belongs to the eukaryotic ribosomal protein eS17 family. (75 aa)
ASAC_0367UDP-glucose 4-epimerase. (322 aa)
fusAElongation factor 2; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily. (731 aa)
proSProlyl-tRNA synthetase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro). (482 aa)
ASAC_0399Hypothetical protein. (133 aa)
ASAC_0403Transcription elongation factor NusA-like protein. (196 aa)
ASAC_0414Probable diphthine synthase. (284 aa)
ASAC_0423V-type ATP synthase subunit H. (128 aa)
rpoKDNA-directed RNA polymerase subunit K; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal RpoK/eukaryotic RPB6 RNA polymerase subunit family. (95 aa)
rpl21e50S ribosomal protein L21e; Belongs to the eukaryotic ribosomal protein eL21 family. (99 aa)
ASAC_0427DNA-directed RNA polymerase subunit F. (118 aa)
ASAC_0429Signal peptidase. (178 aa)
mapMethionine aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val); Belongs to the peptidase M24A family. Methionine aminopeptidase archaeal type 2 subfamily. (303 aa)
ASAC_0444Putative ATPase RIL. (601 aa)
ASAC_0455Putative DNA-directed RNA polymerase subunit M; Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (117 aa)
pelAPelota-like protein; May function in recognizing stalled ribosomes, interact with stem-loop structures in stalled mRNA molecules, and effect endonucleolytic cleavage of the mRNA. May play a role in the release non-functional ribosomes and degradation of damaged mRNAs. Has endoribonuclease activity. (361 aa)
ASAC_0488Sulfolipid biosynthesis protein (sqdB). (423 aa)
ASAC_0511Acyl-CoA ligase (acyl-CoA synthetase). (559 aa)
nacNascent polypeptide-associated complex protein; Contacts the emerging nascent chain on the ribosome. Belongs to the NAC-alpha family. (114 aa)
ASAC_0552Putative transcription initiation factor IIB. (303 aa)
ASAC_0553Hypothetical protein. (94 aa)
rps27ae30S ribosomal protein S27ae; Belongs to the eukaryotic ribosomal protein eS31 family. (60 aa)
rps24e30S ribosomal protein S24e; Belongs to the eukaryotic ribosomal protein eS24 family. (127 aa)
ASAC_0710Oligosaccharyl transferase STT3 like-protein. (769 aa)
ASAC_07862-Keto-3-deoxy-(6-phospho)gluconate aldolase (KD(P)GA). (315 aa)
rtcAProbable RNA 3'-terminal phosphate cyclase; Catalyzes the conversion of 3'-phosphate to a 2',3'-cyclic phosphodiester at the end of RNA. The mechanism of action of the enzyme occurs in 3 steps: (A) adenylation of the enzyme by ATP; (B) transfer of adenylate to an RNA-N3'P to produce RNA-N3'PP5'A; (C) and attack of the adjacent 2'-hydroxyl on the 3'-phosphorus in the diester linkage to produce the cyclic end product. The biological role of this enzyme is unknown but it is likely to function in some aspects of cellular RNA processing. (353 aa)
ASAC_0849Hypothetical protein. (196 aa)
ASAC_0914Hypothetical protein. (112 aa)
rpl37e50S ribosomal protein L37e; Binds to the 23S rRNA; Belongs to the eukaryotic ribosomal protein eL37 family. (62 aa)
ASAC_0926Acyl-CoA ligase (acyl-CoA synthetase). (506 aa)
rpl2350S ribosomal protein L23P; Binds to 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Belongs to the universal ribosomal protein uL23 family. (88 aa)
rpl450S ribosomal protein L4P; Forms part of the polypeptide exit tunnel. (276 aa)
ASAC_093650S ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. (329 aa)
spt5Putative transcription antitermination protein nusG; Stimulates transcription elongation; Belongs to the archaeal Spt5 family. (172 aa)
secEHypothetical protein; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation. (59 aa)
ASAC_0966Membrane-associated phosphatase. (227 aa)
rps230S ribosomal protein S2P; Belongs to the universal ribosomal protein uS2 family. (239 aa)
ASAC_1004DNA-directed RNA polymerase subunit N. (72 aa)
rps930S ribosomal protein S9P; Belongs to the universal ribosomal protein uS9 family. (167 aa)
rpl1350S ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. (156 aa)
rpl18eRibosomal protein L15; Belongs to the eukaryotic ribosomal protein eL18 family. (118 aa)
rpoDDNA-directed RNA polymerase subunit D; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal RpoD/eukaryotic RPB3 RNA polymerase subunit family. (287 aa)
rps1130S ribosomal protein S11P; Located on the platform of the 30S subunit. Belongs to the universal ribosomal protein uS11 family. (131 aa)
rps430S ribosomal protein S4P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. (177 aa)
rps1330S ribosomal protein S13P; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement; Belongs to the universal ribosomal protein uS13 family. (173 aa)
rpl7ae50S ribosomal protein L7Ae; Multifunctional RNA-binding protein that recognizes the K- turn motif in ribosomal RNA, the RNA component of RNase P, box H/ACA, box C/D and box C'/D' sRNAs. (127 aa)
ASAC_1068DNA-directed RNA polymerase subunit E. (193 aa)
ASAC_1071Putative DNA repair helicase. (541 aa)
rps28e30S ribosomal protein S28e; Belongs to the eukaryotic ribosomal protein eS28 family. (83 aa)
infBProbable translation initiation factor IF-2; Function in general translation initiation by promoting the binding of the formylmethionine-tRNA to ribosomes. Seems to function along with eIF-2. (609 aa)
ASAC_1096Hypothetical protein. (138 aa)
eif2gTranslation initiation factor 2 subunit gamma; eIF-2 functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EIF2G subfamily. (424 aa)
rps6e30S ribosomal protein S6e; Belongs to the eukaryotic ribosomal protein eS6 family. (246 aa)
rps1530S ribosomal protein S15P/S13e. (152 aa)
rps3ae30S ribosomal protein S3Ae; Belongs to the eukaryotic ribosomal protein eS1 family. (223 aa)
ASAC_1104Transcription elongation factor, S-II like-protein. (96 aa)
rpl40e50S ribosomal protein L40e; Belongs to the eukaryotic ribosomal protein eL40 family. (57 aa)
ASAC_111030S ribosomal protein S26e. (95 aa)
rpl18a50S ribosomal protein LX. (88 aa)
ftsYProbable signal recognition particle protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). (304 aa)
ASAC_1119Hypothetical protein. (46 aa)
ASAC_1126DNA-binding protein; Belongs to the PDCD5 family. (124 aa)
rpl39eHypothetical protein; Belongs to the eukaryotic ribosomal protein eL39 family. (51 aa)
ASAC_1128Hypothetical protein. (78 aa)
eif6Translation initiation factor 6; Binds to the 50S ribosomal subunit and prevents its association with the 30S ribosomal subunit to form the 70S initiation complex. (226 aa)
rpl15e50S ribosomal protein L15e; Belongs to the eukaryotic ribosomal protein eL15 family. (227 aa)
ASAC_1135Hypothetical protein; Probably involved in the biogenesis of the ribosome. (195 aa)
rpl37ae50S ribosomal protein L37Ae; Binds to the 23S rRNA; Belongs to the eukaryotic ribosomal protein eL43 family. Putative zinc-binding subfamily. (82 aa)
rrp42Probable exosome complex exonuclease 2; Non-catalytic component of the exosome, which is a complex involved in RNA degradation. Contributes to the structuring of the Rrp41 active site. (280 aa)
rrp41Probable exosome complex exonuclease 1; Catalytic component of the exosome, which is a complex involved in RNA degradation. Has 3'->5' exoribonuclease activity. Can also synthesize heteropolymeric RNA-tails. (242 aa)
rrp4Probable exosome complex RNA-binding protein 1; Non-catalytic component of the exosome, which is a complex involved in RNA degradation. Increases the RNA binding and the efficiency of RNA degradation. Confers strong poly(A) specificity to the exosome. (234 aa)
ASAC_1140SBDS_C multi-domain protein. (234 aa)
rpl24e50S ribosomal protein L24e; Binds to the 23S rRNA. (63 aa)
ASAC_1163Putative kinase. (315 aa)
ASAC_1174DNA-directed RNA polymerase subunit H. (68 aa)
ASAC_1175DNA-directed RNA polymerase subunit B; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1179 aa)
ASAC_1176DNA-directed RNA polymerase subunit A; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (889 aa)
rpoA2DNA-directed RNA polymerase subunit A'; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (446 aa)
rpl30e50S ribosomal protein L30e; Belongs to the eukaryotic ribosomal protein eL30 family. (104 aa)
nusATranscription elongation factor NusA-like protein; Participates in transcription termination. Belongs to the NusA family. (150 aa)
rps1230S ribosomal protein S12P; With S4 and S5 plays an important role in translational accuracy. Located at the interface of the 30S and 50S subunits. Belongs to the universal ribosomal protein uS12 family. (145 aa)
rps730S ribosomal protein S7P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center; Belongs to the universal ribosomal protein uS7 family. (203 aa)
tufElongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-Tu/EF-1A subfamily. (436 aa)
rps1030S ribosomal protein S10P; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. (103 aa)
ASAC_1193Diphthamide synthesis protein; Catalyzes the first step of diphthamide biosynthesis, i.e. the transfer of the 3-amino-3-carboxypropyl group from S-adenosyl-L- methionine (SAM) to the C2 position of the imidazole ring of the target histidine residue in translation elongation factor 2 (EF-2). Belongs to the DPH1/DPH2 family. (347 aa)
csl4Exosome complex RNA-binding like-protein Cs14; Non-catalytic component of the exosome, which is a complex involved in RNA degradation. Increases the RNA binding and the efficiency of RNA degradation. Helpful for the interaction of the exosome with A-poor RNAs. (201 aa)
ASAC_1197DNA-directed RNA polymerase II subunit RPB11. (101 aa)
rps19e30S ribosomal protein S19e; May be involved in maturation of the 30S ribosomal subunit. Belongs to the eukaryotic ribosomal protein eS19 family. (151 aa)
rpl650S ribosomal protein L6P; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. (182 aa)
ASAC_122150S ribosomal protein L32e. (135 aa)
rpl19e50S ribosomal protein L19e; Binds to the 23S rRNA; Belongs to the eukaryotic ribosomal protein eL19 family. (156 aa)
rpl1850S ribosomal protein L18P; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. (212 aa)
rps530S ribosomal protein S5P; With S4 and S12 plays an important role in translational accuracy. (199 aa)
rpl3050S ribosomal protein L30P. (157 aa)
rpl1550S ribosomal protein L15P; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. (166 aa)
rpl10e50S ribosomal protein L10e; Belongs to the universal ribosomal protein uL16 family. (182 aa)
eif5aTranslation initiation factor 5A; Functions by promoting the formation of the first peptide bond; Belongs to the eIF-5A family. (136 aa)
tfbTranscription initiation factor IIB; Stabilizes TBP binding to an archaeal box-A promoter. Also responsible for recruiting RNA polymerase II to the pre-initiation complex (DNA-TBP-TFIIB). (318 aa)
ASAC_1248Putative GTP-binding protein; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. (259 aa)
ASAC_1251Hypothetical protein. (103 aa)
rps8e30S ribosomal protein S8e. (133 aa)
rpl250S ribosomal protein L2P; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. (237 aa)
ASAC_1305Putative GTP-binding protein. (338 aa)
ASAC_1306Hypothetical protein. (183 aa)
ASAC_1313SnoRNA binding protein. (417 aa)
flpAFibrillarin-like rRNA/tRNA 2'-O-methyltransferase; Involved in pre-rRNA and tRNA processing. Utilizes the methyl donor S-adenosyl-L-methionine to catalyze the site-specific 2'-hydroxyl methylation of ribose moieties in rRNA and tRNA. Site specificity is provided by a guide RNA that base pairs with the substrate. Methylation occurs at a characteristic distance from the sequence involved in base pairing with the guide RNA; Belongs to the methyltransferase superfamily. Fibrillarin family. (219 aa)
dnaGHypothetical protein; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. Also part of the exosome, which is a complex involved in RNA degradation. Acts as a poly(A)-binding protein that enhances the interaction between heteropolymeric, adenine-rich transcripts and the exosome. (439 aa)
ASAC_1361NMD protein affecting ribosome stability and mRNA decay. (341 aa)
eif1aTranslation initiation factor 1A; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits. (110 aa)
ASAC_1363Serine/threonine protein kinase. (260 aa)
ASAC_1364Predicted RNA-binding protein. (197 aa)
nep1Probable ribosome biogenesis protein NEP1-like protein; Methyltransferase involved in ribosomal biogenesis. Specifically catalyzes the N1-methylation of the pseudouridine corresponding to position 914 in M.jannaschii 16S rRNA. (215 aa)
ASAC_1439Protein L-isoaspartate methyltransferase. (259 aa)
tmcAPredicted P-loop ATPase fused to an acetyltransferase; Catalyzes the formation of N(4)-acetylcytidine (ac(4)C) at the wobble position of tRNA(Met), by using acetyl-CoA as an acetyl donor and ATP (or GTP). (825 aa)
srp54Signal recognition 54 kDa protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily. (444 aa)
Your Current Organism:
Acidilobus saccharovorans
NCBI taxonomy Id: 666510
Other names: A. saccharovorans 345-15, Acidilobus saccharovorans 345-15, Acidilobus saccharovorans str. 345-15, Acidilobus saccharovorans strain 345-15, Acidilobus sp. 345-15
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