(11 nodes) Mixed, incl. Myosin II light chain binding, and Ubiquitin domain network (Daphnia pulex)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	E9FZG4_DAPPU	USP domain-containing protein. (499 aa)
	E9G600_DAPPU	Ubiquitin-like domain-containing protein. (51 aa)
	E9GKP7_DAPPU	Uncharacterized protein. (398 aa)
	E9GM54_DAPPU	Ubiquitin-like domain-containing protein. (111 aa)
	E9GQB9_DAPPU	ANK_REP_REGION domain-containing protein. (133 aa)
	E9GQC5_DAPPU	ANK_REP_REGION domain-containing protein. (144 aa)
	E9H4C1_DAPPU	UBIQUITIN_CONJUGAT_2 domain-containing protein. (448 aa)
	E9HKH9_DAPPU	Uncharacterized protein. (330 aa)
	E9HKI0_DAPPU	Uncharacterized protein. (539 aa)
	E9HL05_DAPPU	PDZ domain-containing protein. (252 aa)
	E9HM22_DAPPU	Ubiquitin-like domain-containing protein. (328 aa)

Your Current Organism:

Daphnia pulex

NCBI taxonomy Id: 6669
Other names: D. pulex, common water flea

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
E9FZG4_DAPPU	E9G600_DAPPU	E9FZG4	E9G600	USP domain-containing protein.	Ubiquitin-like domain-containing protein.	0.744
E9FZG4_DAPPU	E9GKP7_DAPPU	E9FZG4	E9GKP7	USP domain-containing protein.	Uncharacterized protein.	0.686
E9FZG4_DAPPU	E9GM54_DAPPU	E9FZG4	E9GM54	USP domain-containing protein.	Ubiquitin-like domain-containing protein.	0.914
E9FZG4_DAPPU	E9GQB9_DAPPU	E9FZG4	E9GQB9	USP domain-containing protein.	ANK_REP_REGION domain-containing protein.	0.954
E9FZG4_DAPPU	E9GQC5_DAPPU	E9FZG4	E9GQC5	USP domain-containing protein.	ANK_REP_REGION domain-containing protein.	0.954
E9FZG4_DAPPU	E9H4C1_DAPPU	E9FZG4	E9H4C1	USP domain-containing protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein.	0.834
E9FZG4_DAPPU	E9HKH9_DAPPU	E9FZG4	E9HKH9	USP domain-containing protein.	Uncharacterized protein.	0.955
E9FZG4_DAPPU	E9HKI0_DAPPU	E9FZG4	E9HKI0	USP domain-containing protein.	Uncharacterized protein.	0.955
E9FZG4_DAPPU	E9HL05_DAPPU	E9FZG4	E9HL05	USP domain-containing protein.	PDZ domain-containing protein.	0.672
E9FZG4_DAPPU	E9HM22_DAPPU	E9FZG4	E9HM22	USP domain-containing protein.	Ubiquitin-like domain-containing protein.	0.769
E9G600_DAPPU	E9FZG4_DAPPU	E9G600	E9FZG4	Ubiquitin-like domain-containing protein.	USP domain-containing protein.	0.744
E9G600_DAPPU	E9GKP7_DAPPU	E9G600	E9GKP7	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.551
E9G600_DAPPU	E9GM54_DAPPU	E9G600	E9GM54	Ubiquitin-like domain-containing protein.	Ubiquitin-like domain-containing protein.	0.940
E9G600_DAPPU	E9GQB9_DAPPU	E9G600	E9GQB9	Ubiquitin-like domain-containing protein.	ANK_REP_REGION domain-containing protein.	0.707
E9G600_DAPPU	E9GQC5_DAPPU	E9G600	E9GQC5	Ubiquitin-like domain-containing protein.	ANK_REP_REGION domain-containing protein.	0.707
E9G600_DAPPU	E9H4C1_DAPPU	E9G600	E9H4C1	Ubiquitin-like domain-containing protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein.	0.873
E9G600_DAPPU	E9HKH9_DAPPU	E9G600	E9HKH9	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.707
E9G600_DAPPU	E9HKI0_DAPPU	E9G600	E9HKI0	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.707
E9G600_DAPPU	E9HL05_DAPPU	E9G600	E9HL05	Ubiquitin-like domain-containing protein.	PDZ domain-containing protein.	0.551
E9G600_DAPPU	E9HM22_DAPPU	E9G600	E9HM22	Ubiquitin-like domain-containing protein.	Ubiquitin-like domain-containing protein.	0.611