(15 nodes) COP9 signalosome, and Cul2-RING ubiquitin ligase complex network (Daphnia pulex)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	E9FRY8_DAPPU	Uncharacterized protein. (170 aa)
	E9FSM2_DAPPU	RING-type domain-containing protein. (109 aa)
	E9FUY3_DAPPU	PCI domain-containing protein. (275 aa)
	EOG090X0F3A	EOG090X0F3A. (204 aa)
	EOG090X0JP1	EOG090X0JP1. (120 aa)
	E9H194_DAPPU	PCI domain-containing protein. (481 aa)
	EOG090X04DO	EOG090X04DO. (446 aa)
	EOG090X08T4	EOG090X08T4. (311 aa)
	E9H325_DAPPU	MPN domain-containing protein. (306 aa)
	E9HAB9_DAPPU	CULLIN_2 domain-containing protein; Belongs to the cullin family. (697 aa)
	E9HAS1_DAPPU	RING-type domain-containing protein. (109 aa)
	EOG090X04TU	EOG090X04TU. (448 aa)
	E9HIP0_DAPPU	Uncharacterized protein. (332 aa)
	E9HJT7_DAPPU	Skp1_POZ domain-containing protein; Belongs to the SKP1 family. (114 aa)
	E9HRN8_DAPPU	PCI domain-containing protein. (406 aa)

Your Current Organism:

Daphnia pulex

NCBI taxonomy Id: 6669
Other names: D. pulex, common water flea

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
E9FRY8_DAPPU	E9FSM2_DAPPU	E9FRY8	E9FSM2	Uncharacterized protein.	RING-type domain-containing protein.	0.857
E9FRY8_DAPPU	E9FUY3_DAPPU	E9FRY8	E9FUY3	Uncharacterized protein.	PCI domain-containing protein.	0.574
E9FRY8_DAPPU	E9H194_DAPPU	E9FRY8	E9H194	Uncharacterized protein.	PCI domain-containing protein.	0.861
E9FRY8_DAPPU	E9H325_DAPPU	E9FRY8	E9H325	Uncharacterized protein.	MPN domain-containing protein.	0.882
E9FRY8_DAPPU	E9HAB9_DAPPU	E9FRY8	E9HAB9	Uncharacterized protein.	CULLIN_2 domain-containing protein; Belongs to the cullin family.	0.987
E9FRY8_DAPPU	E9HAS1_DAPPU	E9FRY8	E9HAS1	Uncharacterized protein.	RING-type domain-containing protein.	0.857
E9FRY8_DAPPU	E9HIP0_DAPPU	E9FRY8	E9HIP0	Uncharacterized protein.	Uncharacterized protein.	0.660
E9FRY8_DAPPU	E9HJT7_DAPPU	E9FRY8	E9HJT7	Uncharacterized protein.	Skp1_POZ domain-containing protein; Belongs to the SKP1 family.	0.991
E9FRY8_DAPPU	E9HRN8_DAPPU	E9FRY8	E9HRN8	Uncharacterized protein.	PCI domain-containing protein.	0.747
E9FRY8_DAPPU	EOG090X04DO	E9FRY8	E9H1V3	Uncharacterized protein.	EOG090X04DO.	0.785
E9FRY8_DAPPU	EOG090X04TU	E9FRY8	E9HFW3	Uncharacterized protein.	EOG090X04TU.	0.830
E9FRY8_DAPPU	EOG090X08T4	E9FRY8	E9H1X8	Uncharacterized protein.	EOG090X08T4.	0.653
E9FRY8_DAPPU	EOG090X0F3A	E9FRY8	E9GYQ6	Uncharacterized protein.	EOG090X0F3A.	0.681
E9FRY8_DAPPU	EOG090X0JP1	E9FRY8	E9GZN2	Uncharacterized protein.	EOG090X0JP1.	0.993
E9FSM2_DAPPU	E9FRY8_DAPPU	E9FSM2	E9FRY8	RING-type domain-containing protein.	Uncharacterized protein.	0.857
E9FSM2_DAPPU	E9FUY3_DAPPU	E9FSM2	E9FUY3	RING-type domain-containing protein.	PCI domain-containing protein.	0.708
E9FSM2_DAPPU	E9H194_DAPPU	E9FSM2	E9H194	RING-type domain-containing protein.	PCI domain-containing protein.	0.847
E9FSM2_DAPPU	E9H325_DAPPU	E9FSM2	E9H325	RING-type domain-containing protein.	MPN domain-containing protein.	0.858
E9FSM2_DAPPU	E9HAB9_DAPPU	E9FSM2	E9HAB9	RING-type domain-containing protein.	CULLIN_2 domain-containing protein; Belongs to the cullin family.	0.924
E9FSM2_DAPPU	E9HIP0_DAPPU	E9FSM2	E9HIP0	RING-type domain-containing protein.	Uncharacterized protein.	0.830