(10 nodes) Condensin complex network (Daphnia pulex)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	E9FT09_DAPPU	Structural maintenance of chromosomes protein. (1195 aa)
	E9G173_DAPPU	Cnd1 domain-containing protein. (1332 aa)
	E9G2B8_DAPPU	Uncharacterized protein. (198 aa)
	E9G738_DAPPU	Condensin complex subunit 1; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases. (1418 aa)
	E9GRW6_DAPPU	Uncharacterized protein. (620 aa)
	E9GU42_DAPPU	Condensin complex subunit 2; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. (721 aa)
	E9H905_DAPPU	Uncharacterized protein. (469 aa)
	E9HF57_DAPPU	Uncharacterized protein. (37 aa)
	E9HM85_DAPPU	Cnd3 domain-containing protein. (886 aa)
	E9HY69_DAPPU	SMC_N domain-containing protein. (100 aa)

Your Current Organism:

Daphnia pulex

NCBI taxonomy Id: 6669
Other names: D. pulex, common water flea

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
E9FT09_DAPPU	E9G173_DAPPU	E9FT09	E9G173	Structural maintenance of chromosomes protein.	Cnd1 domain-containing protein.	0.991
E9FT09_DAPPU	E9G738_DAPPU	E9FT09	E9G738	Structural maintenance of chromosomes protein.	Condensin complex subunit 1; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases.	0.999
E9FT09_DAPPU	E9GRW6_DAPPU	E9FT09	E9GRW6	Structural maintenance of chromosomes protein.	Uncharacterized protein.	0.995
E9FT09_DAPPU	E9GU42_DAPPU	E9FT09	E9GU42	Structural maintenance of chromosomes protein.	Condensin complex subunit 2; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes.	0.999
E9FT09_DAPPU	E9H905_DAPPU	E9FT09	E9H905	Structural maintenance of chromosomes protein.	Uncharacterized protein.	0.970
E9FT09_DAPPU	E9HF57_DAPPU	E9FT09	E9HF57	Structural maintenance of chromosomes protein.	Uncharacterized protein.	0.970
E9FT09_DAPPU	E9HM85_DAPPU	E9FT09	E9HM85	Structural maintenance of chromosomes protein.	Cnd3 domain-containing protein.	0.999
E9FT09_DAPPU	E9HY69_DAPPU	E9FT09	E9HY69	Structural maintenance of chromosomes protein.	SMC_N domain-containing protein.	0.970
E9G173_DAPPU	E9FT09_DAPPU	E9G173	E9FT09	Cnd1 domain-containing protein.	Structural maintenance of chromosomes protein.	0.991
E9G173_DAPPU	E9G2B8_DAPPU	E9G173	E9G2B8	Cnd1 domain-containing protein.	Uncharacterized protein.	0.963
E9G173_DAPPU	E9G738_DAPPU	E9G173	E9G738	Cnd1 domain-containing protein.	Condensin complex subunit 1; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases.	0.749
E9G173_DAPPU	E9GRW6_DAPPU	E9G173	E9GRW6	Cnd1 domain-containing protein.	Uncharacterized protein.	0.993
E9G173_DAPPU	E9GU42_DAPPU	E9G173	E9GU42	Cnd1 domain-containing protein.	Condensin complex subunit 2; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes.	0.812
E9G173_DAPPU	E9H905_DAPPU	E9G173	E9H905	Cnd1 domain-containing protein.	Uncharacterized protein.	0.871
E9G173_DAPPU	E9HF57_DAPPU	E9G173	E9HF57	Cnd1 domain-containing protein.	Uncharacterized protein.	0.871
E9G173_DAPPU	E9HM85_DAPPU	E9G173	E9HM85	Cnd1 domain-containing protein.	Cnd3 domain-containing protein.	0.747
E9G173_DAPPU	E9HY69_DAPPU	E9G173	E9HY69	Cnd1 domain-containing protein.	SMC_N domain-containing protein.	0.871
E9G2B8_DAPPU	E9G173_DAPPU	E9G2B8	E9G173	Uncharacterized protein.	Cnd1 domain-containing protein.	0.963
E9G2B8_DAPPU	E9G738_DAPPU	E9G2B8	E9G738	Uncharacterized protein.	Condensin complex subunit 1; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases.	0.994
E9G2B8_DAPPU	E9GRW6_DAPPU	E9G2B8	E9GRW6	Uncharacterized protein.	Uncharacterized protein.	0.961