(31 nodes) Epithelial structure maintenance network (Daphnia pulex)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	E9G3G9_DAPPU	Uncharacterized protein. (2858 aa)
	E9FRG0_DAPPU	Protein kinase domain-containing protein. (742 aa)
	E9FTB3_DAPPU	Uncharacterized protein. (1114 aa)
	E9FTE9_DAPPU	Integrin beta. (681 aa)
	E9FUA6_DAPPU	ATG11 domain-containing protein. (1126 aa)
	E9FV00_DAPPU	Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family. (584 aa)
	E9FVY2_DAPPU	Uncharacterized protein. (2565 aa)
	E9FY63_DAPPU	Uncharacterized protein. (275 aa)
	E9G418_DAPPU	Uncharacterized protein. (1296 aa)
	E9G4M3_DAPPU	Integrin_alpha2 domain-containing protein. (461 aa)
	E9G4P3_DAPPU	Integrin_alpha2 domain-containing protein. (272 aa)
	E9G4P4_DAPPU	Integrin_alpha2 domain-containing protein. (98 aa)
	HNT	Hindsight transcription factor-like protein. (1531 aa)
	E9GAU7_DAPPU	Uncharacterized protein. (172 aa)
	E9GET2_DAPPU	Protein kinase domain-containing protein. (762 aa)
	E9GGF7_DAPPU	Phosphatidylinositol 3-kinase catalytic subunit type 3. (906 aa)
	E9GGX7_DAPPU	PI3K/PI4K domain-containing protein; Belongs to the PI3/PI4-kinase family. (68 aa)
	E9GI17_DAPPU	Integrin beta; Belongs to the integrin beta chain family. (815 aa)
	EOG090X085S	EOG090X085S. (242 aa)
	E9GW23_DAPPU	FERM domain-containing protein. (608 aa)
	E9GY66_DAPPU	Uncharacterized protein. (330 aa)
	E9H655_DAPPU	Protein kinase domain-containing protein. (243 aa)
	E9H8V2_DAPPU	Uncharacterized protein. (265 aa)
	E9HAH4_DAPPU	Integrin_alpha2 domain-containing protein; Belongs to the integrin alpha chain family. (1089 aa)
	E9HBT9_DAPPU	Integrin beta; Belongs to the integrin beta chain family. (649 aa)
	E9HEX2_DAPPU	Autophagy-related protein 13; Belongs to the ATG13 family. Metazoan subfamily. (452 aa)
	E9HHZ8_DAPPU	Integrin beta; Belongs to the integrin beta chain family. (605 aa)
	E9HIM4_DAPPU	Uncharacterized protein. (113 aa)
	E9HVR4_DAPPU	Uncharacterized protein. (64 aa)
	E9HZ50_DAPPU	Uncharacterized protein. (181 aa)
	E9HZ52_DAPPU	Uncharacterized protein. (64 aa)

Your Current Organism:

Daphnia pulex

NCBI taxonomy Id: 6669
Other names: D. pulex, common water flea

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
E9FTE9_DAPPU	E9FVY2_DAPPU	E9FTE9	E9FVY2	Integrin beta.	Uncharacterized protein.	0.525
E9FTE9_DAPPU	E9G3G9_DAPPU	E9FTE9	E9G3G9	Integrin beta.	Uncharacterized protein.	0.930
E9FTE9_DAPPU	E9G4M3_DAPPU	E9FTE9	E9G4M3	Integrin beta.	Integrin_alpha2 domain-containing protein.	0.548
E9FTE9_DAPPU	E9G4P3_DAPPU	E9FTE9	E9G4P3	Integrin beta.	Integrin_alpha2 domain-containing protein.	0.548
E9FTE9_DAPPU	E9G4P4_DAPPU	E9FTE9	E9G4P4	Integrin beta.	Integrin_alpha2 domain-containing protein.	0.548
E9FTE9_DAPPU	E9H655_DAPPU	E9FTE9	E9H655	Integrin beta.	Protein kinase domain-containing protein.	0.474
E9FTE9_DAPPU	E9H8V2_DAPPU	E9FTE9	E9H8V2	Integrin beta.	Uncharacterized protein.	0.525
E9FTE9_DAPPU	E9HAH4_DAPPU	E9FTE9	E9HAH4	Integrin beta.	Integrin_alpha2 domain-containing protein; Belongs to the integrin alpha chain family.	0.905
E9FTE9_DAPPU	E9HIM4_DAPPU	E9FTE9	E9HIM4	Integrin beta.	Uncharacterized protein.	0.525
E9FTE9_DAPPU	E9HVR4_DAPPU	E9FTE9	E9HVR4	Integrin beta.	Uncharacterized protein.	0.525
E9FTE9_DAPPU	E9HZ50_DAPPU	E9FTE9	E9HZ50	Integrin beta.	Uncharacterized protein.	0.525
E9FTE9_DAPPU	E9HZ52_DAPPU	E9FTE9	E9HZ52	Integrin beta.	Uncharacterized protein.	0.525
E9FUA6_DAPPU	E9FV00_DAPPU	E9FUA6	E9FV00	ATG11 domain-containing protein.	Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.	0.716
E9FUA6_DAPPU	E9G418_DAPPU	E9FUA6	E9G418	ATG11 domain-containing protein.	Uncharacterized protein.	0.890
E9FUA6_DAPPU	E9GET2_DAPPU	E9FUA6	E9GET2	ATG11 domain-containing protein.	Protein kinase domain-containing protein.	0.999
E9FUA6_DAPPU	E9GGF7_DAPPU	E9FUA6	E9GGF7	ATG11 domain-containing protein.	Phosphatidylinositol 3-kinase catalytic subunit type 3.	0.792
E9FUA6_DAPPU	E9GGX7_DAPPU	E9FUA6	E9GGX7	ATG11 domain-containing protein.	PI3K/PI4K domain-containing protein; Belongs to the PI3/PI4-kinase family.	0.792
E9FUA6_DAPPU	E9HEX2_DAPPU	E9FUA6	E9HEX2	ATG11 domain-containing protein.	Autophagy-related protein 13; Belongs to the ATG13 family. Metazoan subfamily.	0.998
E9FV00_DAPPU	E9FUA6_DAPPU	E9FV00	E9FUA6	Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.	ATG11 domain-containing protein.	0.716
E9FV00_DAPPU	E9G418_DAPPU	E9FV00	E9G418	Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.	Uncharacterized protein.	0.891