(34 nodes) Viral process network (Daphnia pulex)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	E9FWB9_DAPPU	Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (885 aa)
	E9I210_DAPPU	Adaptin_N domain-containing protein. (636 aa)
	E9HZ46_DAPPU	Uncharacterized protein. (176 aa)
	E9HYN5_DAPPU	Uncharacterized protein. (631 aa)
	E9HXR5_DAPPU	B2-adapt-app_C domain-containing protein. (128 aa)
	E9HWB8_DAPPU	Uncharacterized protein. (215 aa)
	E9HV83_DAPPU	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family. (172 aa)
	E9HTS3_DAPPU	Uncharacterized protein. (390 aa)
	E9HJT7_DAPPU	Skp1_POZ domain-containing protein; Belongs to the SKP1 family. (114 aa)
	E9HGK4_DAPPU	Uncharacterized protein. (221 aa)
	E9HD61_DAPPU	WD_REPEATS_REGION domain-containing protein. (319 aa)
	E9HAD5_DAPPU	Sec8_exocyst domain-containing protein. (929 aa)
	E9HAB9_DAPPU	CULLIN_2 domain-containing protein; Belongs to the cullin family. (697 aa)
	E9H8T6_DAPPU	Putative vasopressin-like neuropeptide preprohormone. (137 aa)
	EOG090X0BB3	Autophagy protein 5; Involved in autophagic vesicle formation. (271 aa)
	E9H394_DAPPU	MABP domain-containing protein. (252 aa)
	E9H0L3_DAPPU	AP complex subunit beta. (930 aa)
	EOG090X0JP1	EOG090X0JP1. (120 aa)
	MVL1	Uncharacterized protein MVL1. (557 aa)
	E9GLT4_DAPPU	Uncharacterized protein. (576 aa)
	E9GJA1_DAPPU	Uncharacterized protein. (215 aa)
	E9GG71_DAPPU	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family. (149 aa)
	E9GFH0_DAPPU	Uncharacterized protein. (201 aa)
	E9GDA0_DAPPU	Uncharacterized protein. (233 aa)
	E9G8F9_DAPPU	Uncharacterized protein; Belongs to the AAA ATPase family. (443 aa)
	E9G795_DAPPU	Uncharacterized protein. (176 aa)
	E9G6Y9_DAPPU	Uncharacterized protein. (505 aa)
	EOG090X0EA1	EOG090X0EA1. (220 aa)
	E9FZR4_DAPPU	Uncharacterized protein. (227 aa)
	E9FYR1_DAPPU	RING-type domain-containing protein. (1088 aa)
	E9FYK6_DAPPU	RING-type domain-containing protein. (849 aa)
	E9FW91_DAPPU	Uncharacterized protein. (212 aa)
	E9FT72_DAPPU	Uncharacterized protein. (249 aa)
	E9FRU4_DAPPU	Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway. (183 aa)

Your Current Organism:

Daphnia pulex

NCBI taxonomy Id: 6669
Other names: D. pulex, common water flea

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
E9FRU4_DAPPU	E9FZR4_DAPPU	E9FRU4	E9FZR4	Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.	Uncharacterized protein.	0.584
E9FRU4_DAPPU	E9GJA1_DAPPU	E9FRU4	E9GJA1	Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.	Uncharacterized protein.	0.402
E9FW91_DAPPU	E9FZR4_DAPPU	E9FW91	E9FZR4	Uncharacterized protein.	Uncharacterized protein.	0.650
E9FW91_DAPPU	E9GFH0_DAPPU	E9FW91	E9GFH0	Uncharacterized protein.	Uncharacterized protein.	0.469
E9FW91_DAPPU	E9GJA1_DAPPU	E9FW91	E9GJA1	Uncharacterized protein.	Uncharacterized protein.	0.506
E9FW91_DAPPU	E9HWB8_DAPPU	E9FW91	E9HWB8	Uncharacterized protein.	Uncharacterized protein.	0.588
E9FWB9_DAPPU	E9FZR4_DAPPU	E9FWB9	E9FZR4	Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	Uncharacterized protein.	0.712
E9FWB9_DAPPU	E9GG71_DAPPU	E9FWB9	E9GG71	Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.	0.633
E9FWB9_DAPPU	E9GJA1_DAPPU	E9FWB9	E9GJA1	Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	Uncharacterized protein.	0.528
E9FWB9_DAPPU	E9H0L3_DAPPU	E9FWB9	E9H0L3	Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	AP complex subunit beta.	0.623
E9FWB9_DAPPU	E9HV83_DAPPU	E9FWB9	E9HV83	Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.	0.633
E9FWB9_DAPPU	E9HXR5_DAPPU	E9FWB9	E9HXR5	Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	B2-adapt-app_C domain-containing protein.	0.623
E9FWB9_DAPPU	E9I210_DAPPU	E9FWB9	E9I210	Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	Adaptin_N domain-containing protein.	0.623
E9FWB9_DAPPU	EOG090X0BB3	E9FWB9	E9H8N6	Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	Autophagy protein 5; Involved in autophagic vesicle formation.	0.655
E9FYK6_DAPPU	E9FYR1_DAPPU	E9FYK6	E9FYR1	RING-type domain-containing protein.	RING-type domain-containing protein.	0.998
E9FYK6_DAPPU	E9FZR4_DAPPU	E9FYK6	E9FZR4	RING-type domain-containing protein.	Uncharacterized protein.	0.827
E9FYR1_DAPPU	E9FYK6_DAPPU	E9FYR1	E9FYK6	RING-type domain-containing protein.	RING-type domain-containing protein.	0.998
E9FYR1_DAPPU	E9FZR4_DAPPU	E9FYR1	E9FZR4	RING-type domain-containing protein.	Uncharacterized protein.	0.887
E9FYR1_DAPPU	E9GJA1_DAPPU	E9FYR1	E9GJA1	RING-type domain-containing protein.	Uncharacterized protein.	0.599
E9FZR4_DAPPU	E9FRU4_DAPPU	E9FZR4	E9FRU4	Uncharacterized protein.	Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.	0.584