(43 nodes) Basolateral plasma membrane network (Daphnia pulex)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	E9GXQ9_DAPPU	Uncharacterized protein; Belongs to the MAGUK family. (814 aa)
	E9FRJ5_DAPPU	Uncharacterized protein. (526 aa)
	E9FSP6_DAPPU	Uncharacterized protein. (326 aa)
	EOG090X09D3	EOG090X09D3. (389 aa)
	E9FTB3_DAPPU	Uncharacterized protein. (1114 aa)
	E9FTI0_DAPPU	Uncharacterized protein. (806 aa)
	E9FU58_DAPPU	Vitellogenin domain-containing protein. (912 aa)
	E9FUM5_DAPPU	Uncharacterized protein; Belongs to the MIP/aquaporin (TC 1.A.8) family. (303 aa)
	E9FUM6_DAPPU	Uncharacterized protein; Belongs to the MIP/aquaporin (TC 1.A.8) family. (270 aa)
	E9FUM8_DAPPU	Uncharacterized protein; Belongs to the MIP/aquaporin (TC 1.A.8) family. (273 aa)
	E9FVV8_DAPPU	Uncharacterized protein; Belongs to the MIP/aquaporin (TC 1.A.8) family. (315 aa)
	E9FW64_DAPPU	Uncharacterized protein. (2431 aa)
	EOG090X0ESN	Protein lin-7 homolog; Plays a role in establishing and maintaining the asymmetric distribution of channels and receptors at the plasma membrane of polarized cells; Belongs to the lin-7 family. (199 aa)
	E9FZR6_DAPPU	Uncharacterized protein. (419 aa)
	E9G051_DAPPU	Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family. (883 aa)
	E9G0L6_DAPPU	PDZ domain-containing protein. (77 aa)
	E9G1Z3_DAPPU	Uncharacterized protein. (464 aa)
	E9G2L0_DAPPU	Protein kinase domain-containing protein. (602 aa)
	E9G2V1_DAPPU	Uncharacterized protein. (509 aa)
	E9G331_DAPPU	Non-specific serine/threonine protein kinase. (833 aa)
	E9G3D9_DAPPU	Uncharacterized protein. (156 aa)
	E9G3E0_DAPPU	Uncharacterized protein. (347 aa)
	E9G9V5_DAPPU	Uncharacterized protein; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. (208 aa)
	E9GAL7_DAPPU	HCO3_cotransp domain-containing protein. (317 aa)
	E9GCY5_DAPPU	Uncharacterized protein. (455 aa)
	E9GEH2_DAPPU	HCO3_cotransp domain-containing protein. (121 aa)
	E9GEI4_DAPPU	HCO3_cotransp domain-containing protein. (701 aa)
	E9GLA7_DAPPU	Uncharacterized protein; Belongs to the MIP/aquaporin (TC 1.A.8) family. (330 aa)
	E9GNK1_DAPPU	PDZ domain-containing protein. (85 aa)
	E9GW97_DAPPU	Uncharacterized protein. (323 aa)
	E9H733_DAPPU	Uncharacterized protein. (183 aa)
	E9H8R4_DAPPU	Uncharacterized protein. (637 aa)
	E9H8T0_DAPPU	Uncharacterized protein; Belongs to the MAGUK family. (1585 aa)
	E9HA35_DAPPU	Uncharacterized protein. (1847 aa)
	E9HCE6_DAPPU	MFS domain-containing protein. (495 aa)
	FPN2	Solute carrier family 40 protein; May be involved in iron transport and iron homeostasis. Belongs to the ferroportin (FP) (TC 2.A.100) family. SLC40A subfamily. (555 aa)
	FPN1	Solute carrier family 40 protein; May be involved in iron transport and iron homeostasis. Belongs to the ferroportin (FP) (TC 2.A.100) family. SLC40A subfamily. (544 aa)
	E9HGQ3_DAPPU	Uncharacterized protein. (211 aa)
	E9HGQ6_DAPPU	Uncharacterized protein. (414 aa)
	E9HIJ7_DAPPU	Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family. (593 aa)
	E9HPY6_DAPPU	Uncharacterized protein; Belongs to the MIP/aquaporin (TC 1.A.8) family. (320 aa)
	E9HRF3_DAPPU	Uncharacterized protein. (315 aa)
	inx-10	Innexin; Structural component of the gap junctions. Belongs to the pannexin family. (362 aa)

Your Current Organism:

Daphnia pulex

NCBI taxonomy Id: 6669
Other names: D. pulex, common water flea

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
E9FSP6_DAPPU	E9FZR6_DAPPU	E9FSP6	E9FZR6	Uncharacterized protein.	Uncharacterized protein.	0.616
E9FSP6_DAPPU	E9G2V1_DAPPU	E9FSP6	E9G2V1	Uncharacterized protein.	Uncharacterized protein.	0.461
E9FSP6_DAPPU	EOG090X09D3	E9FSP6	E9FSR0	Uncharacterized protein.	EOG090X09D3.	0.663
E9FW64_DAPPU	E9GNK1_DAPPU	E9FW64	E9GNK1	Uncharacterized protein.	PDZ domain-containing protein.	0.448
E9FW64_DAPPU	E9GXQ9_DAPPU	E9FW64	E9GXQ9	Uncharacterized protein.	Uncharacterized protein; Belongs to the MAGUK family.	0.448
E9FZR6_DAPPU	E9FSP6_DAPPU	E9FZR6	E9FSP6	Uncharacterized protein.	Uncharacterized protein.	0.616
E9FZR6_DAPPU	E9G3D9_DAPPU	E9FZR6	E9G3D9	Uncharacterized protein.	Uncharacterized protein.	0.433
E9FZR6_DAPPU	E9G3E0_DAPPU	E9FZR6	E9G3E0	Uncharacterized protein.	Uncharacterized protein.	0.433
E9FZR6_DAPPU	E9H733_DAPPU	E9FZR6	E9H733	Uncharacterized protein.	Uncharacterized protein.	0.628
E9FZR6_DAPPU	EOG090X09D3	E9FZR6	E9FSR0	Uncharacterized protein.	EOG090X09D3.	0.619
E9G0L6_DAPPU	E9GNK1_DAPPU	E9G0L6	E9GNK1	PDZ domain-containing protein.	PDZ domain-containing protein.	0.489
E9G0L6_DAPPU	E9GXQ9_DAPPU	E9G0L6	E9GXQ9	PDZ domain-containing protein.	Uncharacterized protein; Belongs to the MAGUK family.	0.489
E9G1Z3_DAPPU	E9GNK1_DAPPU	E9G1Z3	E9GNK1	Uncharacterized protein.	PDZ domain-containing protein.	0.448
E9G1Z3_DAPPU	E9GXQ9_DAPPU	E9G1Z3	E9GXQ9	Uncharacterized protein.	Uncharacterized protein; Belongs to the MAGUK family.	0.448
E9G2V1_DAPPU	E9FSP6_DAPPU	E9G2V1	E9FSP6	Uncharacterized protein.	Uncharacterized protein.	0.461
E9G2V1_DAPPU	EOG090X09D3	E9G2V1	E9FSR0	Uncharacterized protein.	EOG090X09D3.	0.552
E9G3D9_DAPPU	E9FZR6_DAPPU	E9G3D9	E9FZR6	Uncharacterized protein.	Uncharacterized protein.	0.433
E9G3D9_DAPPU	EOG090X09D3	E9G3D9	E9FSR0	Uncharacterized protein.	EOG090X09D3.	0.443
E9G3E0_DAPPU	E9FZR6_DAPPU	E9G3E0	E9FZR6	Uncharacterized protein.	Uncharacterized protein.	0.433
E9G3E0_DAPPU	EOG090X09D3	E9G3E0	E9FSR0	Uncharacterized protein.	EOG090X09D3.	0.443