(31 nodes) Apicolateral plasma membrane network (Daphnia pulex)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	E9GGS3_DAPPU	PH_9 domain-containing protein. (380 aa)
	E9GGS4_DAPPU	Uncharacterized protein. (178 aa)
	E9GGS5_DAPPU	Uncharacterized protein. (193 aa)
	E9GI18_DAPPU	Uncharacterized protein. (907 aa)
	E9GI19_DAPPU	FERM domain-containing protein. (316 aa)
	E9GL76_DAPPU	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily. (600 aa)
	E9GNK1_DAPPU	PDZ domain-containing protein. (85 aa)
	E9GT56_DAPPU	Uncharacterized protein. (1334 aa)
	E9GXQ9_DAPPU	Uncharacterized protein; Belongs to the MAGUK family. (814 aa)
	E9H5I8_DAPPU	Tetraspanin. (253 aa)
	E9HA35_DAPPU	Uncharacterized protein. (1847 aa)
	E9HCW1_DAPPU	Uncharacterized protein. (1520 aa)
	E9HE08_DAPPU	Tetraspanin. (252 aa)
	E9HFS0_DAPPU	Uncharacterized protein. (5030 aa)
	E9I6K1_DAPPU	Uncharacterized protein. (112 aa)
	DAPPUDRAFT_6	Uncharacterized protein. (3261 aa)
	E9FU96_DAPPU	Myosin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1013 aa)
	E9FYU5_DAPPU	PDZ domain-containing protein. (124 aa)
	E9FYU6_DAPPU	Uncharacterized protein; Belongs to the MAGUK family. (468 aa)
	E9G072_DAPPU	Uncharacterized protein. (831 aa)
	E9G0L6_DAPPU	PDZ domain-containing protein. (77 aa)
	E9G0U7_DAPPU	Uncharacterized protein; Belongs to the tetraspanin (TM4SF) family. (229 aa)
	E9G588_DAPPU	Uncharacterized protein. (387 aa)
	E9G793_DAPPU	Uncharacterized protein. (3847 aa)
	E9GAL6_DAPPU	Uncharacterized protein. (179 aa)
	E9GAL8_DAPPU	Uncharacterized protein. (429 aa)
	E9GAL9_DAPPU	Uncharacterized protein. (1259 aa)
	E9GAM1_DAPPU	PH domain-containing protein. (247 aa)
	E9GB00_DAPPU	Uncharacterized protein. (2035 aa)
	E9GCY5_DAPPU	Uncharacterized protein. (455 aa)
	E9GDM5_DAPPU	Uncharacterized protein; Belongs to the tetraspanin (TM4SF) family. (216 aa)

Your Current Organism:

Daphnia pulex

NCBI taxonomy Id: 6669
Other names: D. pulex, common water flea

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DAPPUDRAFT_6	E9HFS0_DAPPU	E9FRI4	E9HFS0	Uncharacterized protein.	Uncharacterized protein.	0.902
E9FU96_DAPPU	E9G588_DAPPU	E9FU96	E9G588	Myosin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	Uncharacterized protein.	0.830
E9FYU5_DAPPU	E9GB00_DAPPU	E9FYU5	E9GB00	PDZ domain-containing protein.	Uncharacterized protein.	0.716
E9FYU5_DAPPU	E9GL76_DAPPU	E9FYU5	E9GL76	PDZ domain-containing protein.	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.	0.403
E9FYU6_DAPPU	E9GB00_DAPPU	E9FYU6	E9GB00	Uncharacterized protein; Belongs to the MAGUK family.	Uncharacterized protein.	0.716
E9FYU6_DAPPU	E9GL76_DAPPU	E9FYU6	E9GL76	Uncharacterized protein; Belongs to the MAGUK family.	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.	0.403
E9G0L6_DAPPU	E9GNK1_DAPPU	E9G0L6	E9GNK1	PDZ domain-containing protein.	PDZ domain-containing protein.	0.489
E9G0L6_DAPPU	E9GXQ9_DAPPU	E9G0L6	E9GXQ9	PDZ domain-containing protein.	Uncharacterized protein; Belongs to the MAGUK family.	0.489
E9G588_DAPPU	E9FU96_DAPPU	E9G588	E9FU96	Uncharacterized protein.	Myosin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.830
E9GAL6_DAPPU	E9GAL8_DAPPU	E9GAL6	E9GAL8	Uncharacterized protein.	Uncharacterized protein.	0.509
E9GAL8_DAPPU	E9GAL6_DAPPU	E9GAL8	E9GAL6	Uncharacterized protein.	Uncharacterized protein.	0.509
E9GB00_DAPPU	E9FYU5_DAPPU	E9GB00	E9FYU5	Uncharacterized protein.	PDZ domain-containing protein.	0.716
E9GB00_DAPPU	E9FYU6_DAPPU	E9GB00	E9FYU6	Uncharacterized protein.	Uncharacterized protein; Belongs to the MAGUK family.	0.716
E9GB00_DAPPU	E9GI18_DAPPU	E9GB00	E9GI18	Uncharacterized protein.	Uncharacterized protein.	0.586
E9GB00_DAPPU	E9GI19_DAPPU	E9GB00	E9GI19	Uncharacterized protein.	FERM domain-containing protein.	0.586
E9GB00_DAPPU	E9GL76_DAPPU	E9GB00	E9GL76	Uncharacterized protein.	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.	0.648
E9GB00_DAPPU	E9I6K1_DAPPU	E9GB00	E9I6K1	Uncharacterized protein.	Uncharacterized protein.	0.716
E9GCY5_DAPPU	E9GNK1_DAPPU	E9GCY5	E9GNK1	Uncharacterized protein.	PDZ domain-containing protein.	0.489
E9GCY5_DAPPU	E9GXQ9_DAPPU	E9GCY5	E9GXQ9	Uncharacterized protein.	Uncharacterized protein; Belongs to the MAGUK family.	0.489
E9GI18_DAPPU	E9GB00_DAPPU	E9GI18	E9GB00	Uncharacterized protein.	Uncharacterized protein.	0.586