(26 nodes) Calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules network (Daphnia pulex)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DAPPUDRAFT_6	Uncharacterized protein. (3261 aa)
	E9FRR7_DAPPU	Uncharacterized protein. (870 aa)
	E9FRV6_DAPPU	CA domain-containing protein. (378 aa)
	E9FTE9_DAPPU	Integrin beta. (681 aa)
	E9FTX5_DAPPU	Uncharacterized protein. (6466 aa)
	E9FVP7_DAPPU	Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins. (1533 aa)
	E9FY47_DAPPU	Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family. (3133 aa)
	E9FY97_DAPPU	Uncharacterized protein. (1857 aa)
	E9FYA2_DAPPU	Uncharacterized protein. (734 aa)
	E9FYZ0_DAPPU	Uncharacterized protein. (1081 aa)
	E9G9S1_DAPPU	Uncharacterized protein. (1627 aa)
	E9GI17_DAPPU	Integrin beta; Belongs to the integrin beta chain family. (815 aa)
	E9GIL9_DAPPU	Uncharacterized protein. (388 aa)
	E9GJ66_DAPPU	Uncharacterized protein. (476 aa)
	E9GMB8_DAPPU	Uncharacterized protein. (1123 aa)
	E9GMD5_DAPPU	Uncharacterized protein. (429 aa)
	E9GS84_DAPPU	Uncharacterized protein. (1805 aa)
	E9GS95_DAPPU	Uncharacterized protein. (1849 aa)
	E9GYN0_DAPPU	Uncharacterized protein. (783 aa)
	E9GYR8_DAPPU	Uncharacterized protein. (474 aa)
	E9GYS2_DAPPU	Uncharacterized protein. (232 aa)
	E9HBT9_DAPPU	Integrin beta; Belongs to the integrin beta chain family. (649 aa)
	E9HD90_DAPPU	Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins. (2952 aa)
	E9HFS0_DAPPU	Uncharacterized protein. (5030 aa)
	E9HGV3_DAPPU	Uncharacterized protein. (1785 aa)
	E9HHZ8_DAPPU	Integrin beta; Belongs to the integrin beta chain family. (605 aa)

Your Current Organism:

Daphnia pulex

NCBI taxonomy Id: 6669
Other names: D. pulex, common water flea

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DAPPUDRAFT_6	E9G9S1_DAPPU	E9FRI4	E9G9S1	Uncharacterized protein.	Uncharacterized protein.	0.605
DAPPUDRAFT_6	E9HFS0_DAPPU	E9FRI4	E9HFS0	Uncharacterized protein.	Uncharacterized protein.	0.902
E9FRR7_DAPPU	E9G9S1_DAPPU	E9FRR7	E9G9S1	Uncharacterized protein.	Uncharacterized protein.	0.678
E9FRV6_DAPPU	E9G9S1_DAPPU	E9FRV6	E9G9S1	CA domain-containing protein.	Uncharacterized protein.	0.646
E9FVP7_DAPPU	E9G9S1_DAPPU	E9FVP7	E9G9S1	Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.	Uncharacterized protein.	0.625
E9FY97_DAPPU	E9G9S1_DAPPU	E9FY97	E9G9S1	Uncharacterized protein.	Uncharacterized protein.	0.684
E9FYA2_DAPPU	E9G9S1_DAPPU	E9FYA2	E9G9S1	Uncharacterized protein.	Uncharacterized protein.	0.427
E9FYZ0_DAPPU	E9G9S1_DAPPU	E9FYZ0	E9G9S1	Uncharacterized protein.	Uncharacterized protein.	0.680
E9G9S1_DAPPU	DAPPUDRAFT_6	E9G9S1	E9FRI4	Uncharacterized protein.	Uncharacterized protein.	0.605
E9G9S1_DAPPU	E9FRR7_DAPPU	E9G9S1	E9FRR7	Uncharacterized protein.	Uncharacterized protein.	0.678
E9G9S1_DAPPU	E9FRV6_DAPPU	E9G9S1	E9FRV6	Uncharacterized protein.	CA domain-containing protein.	0.646
E9G9S1_DAPPU	E9FVP7_DAPPU	E9G9S1	E9FVP7	Uncharacterized protein.	Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.	0.625
E9G9S1_DAPPU	E9FY97_DAPPU	E9G9S1	E9FY97	Uncharacterized protein.	Uncharacterized protein.	0.684
E9G9S1_DAPPU	E9FYA2_DAPPU	E9G9S1	E9FYA2	Uncharacterized protein.	Uncharacterized protein.	0.427
E9G9S1_DAPPU	E9FYZ0_DAPPU	E9G9S1	E9FYZ0	Uncharacterized protein.	Uncharacterized protein.	0.680
E9G9S1_DAPPU	E9GMB8_DAPPU	E9G9S1	E9GMB8	Uncharacterized protein.	Uncharacterized protein.	0.675
E9G9S1_DAPPU	E9GMD5_DAPPU	E9G9S1	E9GMD5	Uncharacterized protein.	Uncharacterized protein.	0.646
E9G9S1_DAPPU	E9GS84_DAPPU	E9G9S1	E9GS84	Uncharacterized protein.	Uncharacterized protein.	0.645
E9G9S1_DAPPU	E9GS95_DAPPU	E9G9S1	E9GS95	Uncharacterized protein.	Uncharacterized protein.	0.626
E9G9S1_DAPPU	E9GYR8_DAPPU	E9G9S1	E9GYR8	Uncharacterized protein.	Uncharacterized protein.	0.692