(72 nodes) Cortical cytoskeleton organization network (Daphnia pulex)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	E9FSI9_DAPPU	CG33555-PC-like protein. (3171 aa)
	EOG090X02DF	Elongator complex protein 3; Catalytic tRNA acetyltransferase subunit of the RNA polymerase II elongator complex, which is a component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation. (547 aa)
	E9FST5_DAPPU	Uncharacterized protein. (1120 aa)
	E9FT11_DAPPU	Uncharacterized protein. (1156 aa)
	E9FT35_DAPPU	Uncharacterized protein. (2037 aa)
	E9FT72_DAPPU	Uncharacterized protein. (249 aa)
	E9FTB3_DAPPU	Uncharacterized protein. (1114 aa)
	E9FU76_DAPPU	C2 domain-containing protein. (150 aa)
	E9FU84_DAPPU	Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (1508 aa)
	E9FUH4_DAPPU	Uncharacterized protein. (1671 aa)
	E9FWB9_DAPPU	Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (885 aa)
	E9FWU1_DAPPU	UDENN domain-containing protein. (1746 aa)
	E9FWU4_DAPPU	Uncharacterized protein. (1029 aa)
	E9FXU2_DAPPU	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (843 aa)
	E9FZG7_DAPPU	Uncharacterized protein. (164 aa)
	Gnai	Guanine nucleotide-binding protein G(I) alpha-1 subunit. (356 aa)
	E9G2H3_DAPPU	Nudix hydrolase domain-containing protein. (407 aa)
	E9G2Y1_DAPPU	Uncharacterized protein. (5227 aa)
	E9G380_DAPPU	Polo kinase-like protein, copy C. (513 aa)
	E9G3L4_DAPPU	Uncharacterized protein. (634 aa)
	E9G3S8_DAPPU	Serine/threonine-protein kinase PLK. (587 aa)
	E9G5D8_DAPPU	Uncharacterized protein. (178 aa)
	E9G7B9_DAPPU	Serine/threonine-protein kinase PLK. (586 aa)
	E9G8Z9_DAPPU	Uncharacterized protein. (1720 aa)
	E9G9J2_DAPPU	Cytoplasmic FMR1-interacting protein; Belongs to the CYFIP family. (1309 aa)
	E9GB00_DAPPU	Uncharacterized protein. (2035 aa)
	E9GB14_DAPPU	Uncharacterized protein. (344 aa)
	E9GBR8_DAPPU	Uncharacterized protein. (815 aa)
	E9GCQ5_DAPPU	Myotubularin-related protein-like protein 2. (513 aa)
	E9GCT1_DAPPU	Uncharacterized protein. (636 aa)
	E9GF51_DAPPU	PH domain-containing protein. (714 aa)
	E9GJA1_DAPPU	Uncharacterized protein. (215 aa)
	E9GKC7_DAPPU	Uncharacterized protein. (118 aa)
	E9GLG3_DAPPU	CKK domain-containing protein. (144 aa)
	E9GLS2_DAPPU	Uncharacterized protein. (817 aa)
	E9GLS6_DAPPU	Uncharacterized protein. (271 aa)
	E9GLV2_DAPPU	Uncharacterized protein; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. (1380 aa)
	E9GM64_DAPPU	Uncharacterized protein. (434 aa)
	E9GNJ0_DAPPU	PH domain-containing protein. (384 aa)
	E9GSA5_DAPPU	Uncharacterized protein. (1295 aa)
	E9GU15_DAPPU	Uncharacterized protein. (213 aa)
	E9GU61_DAPPU	BTB domain-containing protein. (727 aa)
	E9GUK6_DAPPU	Uncharacterized protein. (105 aa)
	E9GVC8_DAPPU	Protein kinase domain-containing protein. (1294 aa)
	E9GVD9_DAPPU	Uncharacterized protein. (385 aa)
	E9GY44_DAPPU	Uncharacterized protein. (899 aa)
	E9GY51_DAPPU	Uncharacterized protein. (156 aa)
	E9H0X8_DAPPU	Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (746 aa)
	Gnao2	Guanine nucleotide binding protein, alpha activating activity polypeptide O. (346 aa)
	E9H294_DAPPU	Uncharacterized protein. (270 aa)
	E9H3W6_DAPPU	Uncharacterized protein. (389 aa)
	E9H7J7_DAPPU	GBD/FH3 domain-containing protein. (501 aa)
	E9H7U1_DAPPU	Uncharacterized protein. (276 aa)
	E9H7W0_DAPPU	WH2 domain-containing protein. (483 aa)
	Gnao	Guanine nucleotide-binding protein G(O) subunit alpha 1. (354 aa)
	E9H927_DAPPU	SH3 domain-containing protein. (457 aa)
	E9HAD5_DAPPU	Sec8_exocyst domain-containing protein. (929 aa)
	E9HC20_DAPPU	Uncharacterized protein. (340 aa)
	E9HFZ6_DAPPU	Uncharacterized protein. (592 aa)
	E9HH84_DAPPU	Uncharacterized protein. (163 aa)
	E9HHT7_DAPPU	Uncharacterized protein. (198 aa)
	E9HJK2_DAPPU	Uncharacterized protein. (57 aa)
	E9HJK4_DAPPU	Uncharacterized protein. (133 aa)
	E9HKJ8_DAPPU	Uncharacterized protein. (1242 aa)
	E9HL06_DAPPU	Uncharacterized protein. (192 aa)
	E9HQ05_DAPPU	Uncharacterized protein. (3383 aa)
	E9HRF9_DAPPU	Uncharacterized protein. (321 aa)
	E9HW56_DAPPU	Putative polo kinase psuedogene copy i. (171 aa)
	E9HWA4_DAPPU	Uncharacterized protein. (324 aa)
	E9I0H2_DAPPU	Protein kinase domain-containing protein. (103 aa)
	E9I4J4_DAPPU	Uncharacterized protein. (276 aa)
	E9I5I3_DAPPU	Uncharacterized protein. (371 aa)

Your Current Organism:

Daphnia pulex

NCBI taxonomy Id: 6669
Other names: D. pulex, common water flea

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
E9FST5_DAPPU	E9FT11_DAPPU	E9FST5	E9FT11	Uncharacterized protein.	Uncharacterized protein.	0.516
E9FST5_DAPPU	E9G9J2_DAPPU	E9FST5	E9G9J2	Uncharacterized protein.	Cytoplasmic FMR1-interacting protein; Belongs to the CYFIP family.	0.988
E9FST5_DAPPU	E9GU61_DAPPU	E9FST5	E9GU61	Uncharacterized protein.	BTB domain-containing protein.	0.409
E9FST5_DAPPU	E9GUK6_DAPPU	E9FST5	E9GUK6	Uncharacterized protein.	Uncharacterized protein.	0.409
E9FST5_DAPPU	E9GY51_DAPPU	E9FST5	E9GY51	Uncharacterized protein.	Uncharacterized protein.	0.556
E9FST5_DAPPU	E9H7W0_DAPPU	E9FST5	E9H7W0	Uncharacterized protein.	WH2 domain-containing protein.	0.980
E9FST5_DAPPU	E9H927_DAPPU	E9FST5	E9H927	Uncharacterized protein.	SH3 domain-containing protein.	0.962
E9FST5_DAPPU	E9HFZ6_DAPPU	E9FST5	E9HFZ6	Uncharacterized protein.	Uncharacterized protein.	0.409
E9FST5_DAPPU	E9HHT7_DAPPU	E9FST5	E9HHT7	Uncharacterized protein.	Uncharacterized protein.	0.409
E9FST5_DAPPU	E9HL06_DAPPU	E9FST5	E9HL06	Uncharacterized protein.	Uncharacterized protein.	0.409
E9FT11_DAPPU	E9FST5_DAPPU	E9FT11	E9FST5	Uncharacterized protein.	Uncharacterized protein.	0.516
E9FT11_DAPPU	E9FWU4_DAPPU	E9FT11	E9FWU4	Uncharacterized protein.	Uncharacterized protein.	0.728
E9FT11_DAPPU	E9FXU2_DAPPU	E9FT11	E9FXU2	Uncharacterized protein.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.518
E9FT11_DAPPU	E9G9J2_DAPPU	E9FT11	E9G9J2	Uncharacterized protein.	Cytoplasmic FMR1-interacting protein; Belongs to the CYFIP family.	0.517
E9FT11_DAPPU	E9GCQ5_DAPPU	E9FT11	E9GCQ5	Uncharacterized protein.	Myotubularin-related protein-like protein 2.	0.557
E9FT11_DAPPU	E9GLV2_DAPPU	E9FT11	E9GLV2	Uncharacterized protein.	Uncharacterized protein; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family.	0.706
E9FT11_DAPPU	E9GNJ0_DAPPU	E9FT11	E9GNJ0	Uncharacterized protein.	PH domain-containing protein.	0.862
E9FT11_DAPPU	E9GU61_DAPPU	E9FT11	E9GU61	Uncharacterized protein.	BTB domain-containing protein.	0.733
E9FT11_DAPPU	E9GUK6_DAPPU	E9FT11	E9GUK6	Uncharacterized protein.	Uncharacterized protein.	0.847
E9FT11_DAPPU	E9GVC8_DAPPU	E9FT11	E9GVC8	Uncharacterized protein.	Protein kinase domain-containing protein.	0.511