(116 nodes) Cell body network (Daphnia pulex)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	E9G7D9_DAPPU	Uncharacterized protein. (893 aa)
	E9H1I8_DAPPU	Uncharacterized protein. (197 aa)
	E9H169_DAPPU	Ribosomal_L16 domain-containing protein. (219 aa)
	E9H109_DAPPU	Uncharacterized protein. (694 aa)
	E9H0I3_DAPPU	Uncharacterized protein. (1577 aa)
	E9GZT4_DAPPU	Uncharacterized protein. (72 aa)
	E9GZT3_DAPPU	Uncharacterized protein. (142 aa)
	E9GZT2_DAPPU	Uncharacterized protein. (191 aa)
	E9GZM6_DAPPU	BH4_AAA_HYDROXYL_2 domain-containing protein. (520 aa)
	E9GZH8_DAPPU	GLUE N-terminal domain-containing protein. (326 aa)
	E9GZG2_DAPPU	Uncharacterized protein. (603 aa)
	E9GY19_DAPPU	Uncharacterized protein. (98 aa)
	E9GWI4_DAPPU	Lipocln_cytosolic_FA-bd_dom domain-containing protein; Belongs to the calycin superfamily. Lipocalin family. (201 aa)
	E9GUJ7_DAPPU	Uncharacterized protein. (211 aa)
	E9GTV2_DAPPU	Uncharacterized protein. (73 aa)
	E9GTG0_DAPPU	Uncharacterized protein. (87 aa)
	E9GTF9_DAPPU	Uncharacterized protein. (274 aa)
	E9GRT9_DAPPU	W2 domain-containing protein. (418 aa)
	E9GRP0_DAPPU	DRBM domain-containing protein. (131 aa)
	E9GQS1_DAPPU	Uncharacterized protein. (435 aa)
	E9GPX3_DAPPU	Uncharacterized protein. (1563 aa)
	E9GPW1_DAPPU	COR domain-containing protein. (528 aa)
	E9GPV8_DAPPU	Uncharacterized protein. (779 aa)
	S6K	Ribosomal protein S6 kinase. (730 aa)
	E9GMB1_DAPPU	Uncharacterized protein; Belongs to the DEAD box helicase family. (450 aa)
	E9GLC4_DAPPU	Rap-GAP domain-containing protein. (823 aa)
	E9GLC3_DAPPU	Uncharacterized protein. (677 aa)
	E9GL27_DAPPU	Uncharacterized protein. (216 aa)
	E9GKY9_DAPPU	Uncharacterized protein. (2862 aa)
	E9GJA1_DAPPU	Uncharacterized protein. (215 aa)
	E9GI97_DAPPU	Uncharacterized protein; Belongs to the G-protein coupled receptor Fz/Smo family. (1093 aa)
	E9GGL9_DAPPU	RIC3 domain-containing protein. (1915 aa)
	E9GFU7_DAPPU	Uncharacterized protein. (730 aa)
	E9GFH0_DAPPU	Uncharacterized protein. (201 aa)
	E9GF31_DAPPU	Uncharacterized protein. (414 aa)
	E9GDK0_DAPPU	Uncharacterized protein. (208 aa)
	E9GCU9_DAPPU	SAC domain-containing protein. (588 aa)
	E9GBU1_DAPPU	Dilute domain-containing protein. (463 aa)
	E9GBS6_DAPPU	Dilute domain-containing protein. (534 aa)
	E9GAY0_DAPPU	Uncharacterized protein. (3397 aa)
	E9G8Z5_DAPPU	PBPe domain-containing protein. (392 aa)
	E9G7D8_DAPPU	Uncharacterized protein. (389 aa)
	E9G4A4_DAPPU	ANK_REP_REGION domain-containing protein. (523 aa)
	E9G429_DAPPU	Uncharacterized protein. (1028 aa)
	E9G336_DAPPU	A4_EXTRA domain-containing protein. (662 aa)
	E9G2W8_DAPPU	Uncharacterized protein. (214 aa)
	E9G2M5_DAPPU	Non-specific serine/threonine protein kinase. (532 aa)
	E9G2G0_DAPPU	Uncharacterized protein. (216 aa)
	E9G299_DAPPU	Uncharacterized protein. (300 aa)
	E9G247_DAPPU	Fascin. (507 aa)
	E9G204_DAPPU	Uncharacterized protein. (270 aa)
	DFD	Putative homrotic deformed protein. (469 aa)
	E9G0Z3_DAPPU	Uncharacterized protein. (431 aa)
	E9FZR4_DAPPU	Uncharacterized protein. (227 aa)
	E9FYZ3_DAPPU	Uncharacterized protein. (2271 aa)
	E9FYQ9_DAPPU	Uncharacterized protein. (581 aa)
	DpuGr27	Uncharacterized protein DpuGr27; Belongs to the insect chemoreceptor superfamily. Gustatory receptor (GR) family. (412 aa)
	DpuGr28	Uncharacterized protein DpuGr28; Belongs to the insect chemoreceptor superfamily. Gustatory receptor (GR) family. (391 aa)
	DpuGr29	Uncharacterized protein DpuGr29; Belongs to the insect chemoreceptor superfamily. Gustatory receptor (GR) family. (379 aa)
	E9FX96_DAPPU	Aa_trans domain-containing protein. (490 aa)
	E9FWU1_DAPPU	UDENN domain-containing protein. (1746 aa)
	E9FW91_DAPPU	Uncharacterized protein. (212 aa)
	E9FW25_DAPPU	Uncharacterized protein. (1032 aa)
	E9FV86_DAPPU	Uncharacterized protein. (422 aa)
	E9FUZ5_DAPPU	E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation. (379 aa)
	E9FUZ3_DAPPU	E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation. (1368 aa)
	E9FUV9_DAPPU	Protein disulfide-isomerase. (519 aa)
	E9FSY8_DAPPU	Uncharacterized protein. (2379 aa)
	PSN	Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family. (448 aa)
	E9FS31_DAPPU	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (362 aa)
	E9FS12_DAPPU	Uncharacterized protein. (324 aa)
	E9FRT8_DAPPU	Lipocln_cytosolic_FA-bd_dom domain-containing protein; Belongs to the calycin superfamily. Lipocalin family. (193 aa)
	E9FRA4_DAPPU	CaMBD domain-containing protein. (437 aa)
	E9FR28_DAPPU	Putative PDF receptor variant 2; Belongs to the G-protein coupled receptor 2 family. (502 aa)
	E9FQX9_DAPPU	t-SNARE coiled-coil homology domain-containing protein. (227 aa)
	E9I4J6_DAPPU	Ion_trans domain-containing protein. (214 aa)
	E9I3R6_DAPPU	Uncharacterized protein. (141 aa)
	E9I2S2_DAPPU	Uncharacterized protein. (352 aa)
	E9HWB8_DAPPU	Uncharacterized protein. (215 aa)
	E9HUT3_DAPPU	Nicotinamide-nucleotide adenylyltransferase. (227 aa)
	E9HUT0_DAPPU	Nicotinamide-nucleotide adenylyltransferase. (344 aa)
	E9HSH0_DAPPU	Putative boule protein. (319 aa)
	E9HR82_DAPPU	Uncharacterized protein. (343 aa)
	E9HR66_DAPPU	Protein kinase domain-containing protein. (931 aa)
	E9HQX5_DAPPU	Uncharacterized protein. (781 aa)
	E9HQ33_DAPPU	RRM domain-containing protein. (181 aa)
	E9HQ31_DAPPU	Uncharacterized protein. (388 aa)
	E9HMU7_DAPPU	ANK_REP_REGION domain-containing protein. (679 aa)
	E9HMH3_DAPPU	ANK_REP_REGION domain-containing protein. (474 aa)
	E9HME4_DAPPU	ANK_REP_REGION domain-containing protein. (448 aa)
	E9HKF4_DAPPU	Uncharacterized protein. (886 aa)
	E9HK95_DAPPU	Uncharacterized protein. (361 aa)
	E9HIT2_DAPPU	Uncharacterized protein. (207 aa)
	E9HIP1_DAPPU	Uncharacterized protein; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family. (369 aa)
	E9HIB2_DAPPU	Uncharacterized protein. (201 aa)
	E9HGK4_DAPPU	Uncharacterized protein. (221 aa)
	E9HG78_DAPPU	CaMBD domain-containing protein. (246 aa)
	E9HG77_DAPPU	CaMBD domain-containing protein. (513 aa)
	E9HDV8_DAPPU	Protein kinase domain-containing protein. (597 aa)
	E9HDV7_DAPPU	Uncharacterized protein. (1861 aa)
	E9HDK8_DAPPU	ANK_REP_REGION domain-containing protein. (428 aa)
	E9HCV3_DAPPU	Protein kinase domain-containing protein. (692 aa)
	E9HCB8_DAPPU	Uncharacterized protein. (1246 aa)
	E9HAE5_DAPPU	Uncharacterized protein. (344 aa)
	E9HA47_DAPPU	ANK_REP_REGION domain-containing protein. (1622 aa)
	E9HA36_DAPPU	Ion_trans domain-containing protein. (174 aa)
	E9H8V4_DAPPU	Sorting nexin; Belongs to the sorting nexin family. (541 aa)
	E9H7P9_DAPPU	F-box domain-containing protein. (584 aa)
	E9H736_DAPPU	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1820 aa)
	E9H671_DAPPU	Uncharacterized protein. (942 aa)
	E9H5J3_DAPPU	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily. (467 aa)
	E9H4B8_DAPPU	Uncharacterized protein. (514 aa)
	E9H3M8_DAPPU	Uncharacterized protein. (724 aa)
	E9H3I5_DAPPU	Cyclin dependent kinase-like protein 5 activator. (296 aa)
	E9H328_DAPPU	Uncharacterized protein. (208 aa)
	E9H292_DAPPU	Uncharacterized protein. (467 aa)

Your Current Organism:

Daphnia pulex

NCBI taxonomy Id: 6669
Other names: D. pulex, common water flea

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
E9FQX9_DAPPU	E9FW91_DAPPU	E9FQX9	E9FW91	t-SNARE coiled-coil homology domain-containing protein.	Uncharacterized protein.	0.415
E9FQX9_DAPPU	E9GDK0_DAPPU	E9FQX9	E9GDK0	t-SNARE coiled-coil homology domain-containing protein.	Uncharacterized protein.	0.603
E9FQX9_DAPPU	E9I3R6_DAPPU	E9FQX9	E9I3R6	t-SNARE coiled-coil homology domain-containing protein.	Uncharacterized protein.	0.603
E9FS31_DAPPU	E9GJA1_DAPPU	E9FS31	E9GJA1	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.589
E9FS31_DAPPU	E9GUJ7_DAPPU	E9FS31	E9GUJ7	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.490
E9FS31_DAPPU	E9HIB2_DAPPU	E9FS31	E9HIB2	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.490
E9FSY8_DAPPU	E9FYZ3_DAPPU	E9FSY8	E9FYZ3	Uncharacterized protein.	Uncharacterized protein.	0.483
E9FUV9_DAPPU	E9GPV8_DAPPU	E9FUV9	E9GPV8	Protein disulfide-isomerase.	Uncharacterized protein.	0.418
E9FUV9_DAPPU	E9GPW1_DAPPU	E9FUV9	E9GPW1	Protein disulfide-isomerase.	COR domain-containing protein.	0.418
E9FUV9_DAPPU	E9GPX3_DAPPU	E9FUV9	E9GPX3	Protein disulfide-isomerase.	Uncharacterized protein.	0.418
E9FUV9_DAPPU	E9HDV7_DAPPU	E9FUV9	E9HDV7	Protein disulfide-isomerase.	Uncharacterized protein.	0.418
E9FUV9_DAPPU	E9HDV8_DAPPU	E9FUV9	E9HDV8	Protein disulfide-isomerase.	Protein kinase domain-containing protein.	0.418
E9FUZ3_DAPPU	E9FUZ5_DAPPU	E9FUZ3	E9FUZ5	E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation.	E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation.	0.928
E9FUZ5_DAPPU	E9FUZ3_DAPPU	E9FUZ5	E9FUZ3	E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation.	E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation.	0.928
E9FW91_DAPPU	E9FQX9_DAPPU	E9FW91	E9FQX9	Uncharacterized protein.	t-SNARE coiled-coil homology domain-containing protein.	0.415
E9FW91_DAPPU	E9FZR4_DAPPU	E9FW91	E9FZR4	Uncharacterized protein.	Uncharacterized protein.	0.650
E9FW91_DAPPU	E9G2G0_DAPPU	E9FW91	E9G2G0	Uncharacterized protein.	Uncharacterized protein.	0.472
E9FW91_DAPPU	E9G2W8_DAPPU	E9FW91	E9G2W8	Uncharacterized protein.	Uncharacterized protein.	0.402
E9FW91_DAPPU	E9GDK0_DAPPU	E9FW91	E9GDK0	Uncharacterized protein.	Uncharacterized protein.	0.479
E9FW91_DAPPU	E9GFH0_DAPPU	E9FW91	E9GFH0	Uncharacterized protein.	Uncharacterized protein.	0.469